Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60520g00003 ATGGCTGAAGCACTTGTTGCTGGAGCTTTTCTTTCTGGCTTCATCAATGTTGTTATTGACAGGCTCATTTCATCTGAGTTTGTCAACTTGGTAGTGGGTAAGAAGCTGAACCAACAGTTGGTTAAGAGGCTTCAGACTGCTCTCTTGGCTGCTGAAGCTCTGGTTGCAGACGCCGAGCAAAAGCAGTTTGGAAACGATCTTGTGAGGAAATGGCTTGATAGTCTCAGGGATGCTCTCTACACTGCTGATGACTTGCTAGACTGTGTCTTCATCAAAGCTGAAATTCGCAGCAAGGTACGCAATCGCCTTTCTCGTTTCCTTAGTTTGTCTGATAGGAAGATGGTGACTAAGATAGAAGAGGTGGTTAATAGAATAGAAGATCTTGAGAAGCGCAAAGATACCCTTGGTCTTGAAAAGATTCCAACGGGTAGCTCCTCATGGAGAACACCATCCACTTGTCTTGTAAAGGGAAATGTGTATGGCAGGGATGATGACAAACAGGCATTAATCAAGATGCTGCATGGCAACAATGATCATAAGTTGTCTGTCATCTCTATTGTTGGTATGGGCGGGGTTGGTAAAACAACTTTAGCACAATGGCTGTACAACAATGAGGATTTGATGAAGGGGTTTGATATGAAAGCATGGGTTTGTGTTTCTGAAAATTTTGATGTCATTGAGACTTCAAAAAATGTTTTAAGGGGGATCACTTCAAGAGTTTGTAGTCTTGAGGACTTCAATTCAATTCAACTAGATTTGAAGGAACAGTTGTCACAAAAGAAGTTCCTCATTGTTCTGGACGATGTTTGGAGTAATGACCGTGAAATGTGGAATAGTTTTATAACCCCTTTTCGATATGGCACAAATGGAAGCACTCTTCTTCTAACTGCCCGCAAGAAAAATGTTGGTCCAATAGATCAAAATTATGAATCTTACATTCTCAAGGGATTGTCAGATGATTATTGTTGGTCTATTTTTGCGGACAATGCATCCTTTCCTGAATCAAATGGGAGTTCAGAACTGGAAGGACTAGGTAGAAAGATTGTCAAGAAGTGTGATGGCTTGCCGTTAGCTGCAGAAACACTTGGGCGCTTGTTGCACTCAAAGCATGATGCTAGGGAATGGAATAAAATACTATTGAGTGACATTTGGGAATTTCCTATCACTGACAGTAAGATTGTTCCTGCATTATTAATAAGTTACTATCATCTGCCTTCATATTTAAAACGATGCTTTGTTTATTCTTCATTGTATCCAAAAGATTATCAATTTGATAGAAATGAATTAATCTTGCTTTGGATGGCTGAAGATCTTTTACGACCACCGAAAAGGGGAGAGACTTTAGAAGAAGTTGGTTGCGAGTGTTTTGATGACTTGGCTTCAAGACTTTTTTTCAAGCAGGTCGAAGATGATGATGATAAGTATTTTGTGATGCATGACCTCGTGCATGACTTGGCAACTTTTCTTGCTGGAGAATTTTATTGTAGATTATCCGAAGAACTTGGTGAAGTGGAAGAGATCAGTATTAATGACTTGAGAGATTTATTTGATTTATTTGACATATTGTCAAAGAATAAATACTTGAGAGTTTTATCCTTTGATAGAGTTGATACAATTCCGGATTCAATAGGCAACTTGATCCATTTGCGCTATTTGAATCTCTCTCGAAGTGCTGTTAAGAAATTGCCGGAGTCATTGTGCAATTTGTGCAGGTTACAAACATTAAAGCTAGAATATTGTTTAGAGCTGACTGTGCTTCCCGATGGAATGCATAATCTTGTGAATTTGCAGCATCTTGATACAAGGAGTGTTCCTCTAAAAGAAATGCCCAAAGACATGGGCAAATTGAAGCAGTTGCAGTTTTTAAGCAAATTTCCCGTGGGCAAGCACAAAGACAATGGAATCCAAGAGTTAGGAGGACTCTTAAATCTTCATGGATCATTTGAGATTCAGAAATTAGAGAATGTTGTTGAAGCGAATCAGGCAAGGATTGCAAGGATGATAGATAAGAAACACTTGGAATCTTTGTTGTTGGAATGGTCTTCAGGTGATGATATGGTTTCAGACACACAAAGTGAAAGAGATATACTCCACAGCTTGCAACCGCACACTGGCTTGAAAGCGTTGAGAATCGAGGGATACAAAGGTAAAATATTTCCAAACTGGATTGGGTGTTCTTCCTACAACACTATGACAAGTGTAACTCTGGTGTCTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAGCTTCAATCTCTTAAGTCCCTGTGGATCCAAGGTTTTGATCAGCTCAAGTGTATTGGTGATGAGTTTTTCAAGAATGAAGATGATCATTCTTTGCATATTACTCCTTTTCCCTCACTGGAGACATTGAACTTTGATGATATGCCGTGTTGGGAGGTGTGGTACTTACCCGGCTCAGAAGCTTTTCCTCAGCTTAAGAAGCTTCGAATAACATTGTGCCGAATGTTAAAGGGAGACATGGTTAATCACGTATTAATGAGAATCATTTCTTCCTCATTGCATGTTTCGAAAGTTCGCAAACTGGAAATACGAGAAGATGAAGCATGGGGTAGAGATATGTCACTTGAAGGGGACTGTTTATCAATTAGAGGATTTGAATCTATGGTGGAGTATGCATTTAAGGCAAAGATCATCCACCTTCTAACTTCCCTCCAAGAAATACACATCTCAGGGTGTTGGTCTGTTGTATTCTTGCAGCACAATTGTTTATCCAAATCTTTGCAAAAACTCACAATCCGGCGTTGCAGAAAACTGTTGGTAGAGCTCAAAATAGAAGACAGTTGGGATTCACTAACCTCTTTCTCCTTGGATGCCTTTCCCAATCTCAAGATTCTTGAGATACAAGTGTGTAAGAATCTGGAATCAGTTTCAATGTCAGAGCCACTACACGCTGCTCTTCAACGTCTCACCATCTGTCAATGCCCCGAATTTGTGTCATTTACAGGAGAAGGATTGGCTGCACCAAACTTGACTCATCTCAGTGTTGCAGGTTGCTCAAAGTTGGAGGCATTGCCACATGACATGAATACTCTTCTCCCCAATTTGCATTCTCTCAGCATACAAGGTTGCCCAAATATTTGTAGCTTGCCAGAGAGTGGTTTGCCACCTAACCTGAAAGAGCTTACGGTGGGAGGTTGCGAGCAACAACTGAGAGATCTATCATGGATGGGAAACTTGGAGACCCTCACTCATCTCAAAATTGATGGTAGTGGTTGTGAGAGCATAATAAGGTCATACCCAGAGATGGGTTCACTGCCCCACCTTCCCTCCCTTACCACTCTAAAGATATGGAGGTTTCATAATCTGAAGTCGCTGGAGTGCAACGAGCTTCTCCGCCTCACCTCGCTCCAATATTTACACATTTCATACTGCTGGAGGTTGGAGGATATGGCTGGAGAAAAGCTGCCTTCCTCTCTCTTACTACTTCAAATTAAAGGGTGTCCATTGCTGGAAGAACACTGCAAGAACAAACATCAACATATTTGGCCCAAAATTGAACACATCCCCACCATTCAAGTCTATGGCTAA 3555 0.4087 MAEALVAGAFLSGFINVVIDRLISSEFVNLVVGKKLNQQLVKRLQTALLAAEALVADAEQKQFGNDLVRKWLDSLRDALYTADDLLDCVFIKAEIRSKVRNRLSRFLSLSDRKMVTKIEEVVNRIEDLEKRKDTLGLEKIPTGSSSWRTPSTCLVKGNVYGRDDDKQALIKMLHGNNDHKLSVISIVGMGGVGKTTLAQWLYNNEDLMKGFDMKAWVCVSENFDVIETSKNVLRGITSRVCSLEDFNSIQLDLKEQLSQKKFLIVLDDVWSNDREMWNSFITPFRYGTNGSTLLLTARKKNVGPIDQNYESYILKGLSDDYCWSIFADNASFPESNGSSELEGLGRKIVKKCDGLPLAAETLGRLLHSKHDAREWNKILLSDIWEFPITDSKIVPALLISYYHLPSYLKRCFVYSSLYPKDYQFDRNELILLWMAEDLLRPPKRGETLEEVGCECFDDLASRLFFKQVEDDDDKYFVMHDLVHDLATFLAGEFYCRLSEELGEVEEISINDLRDLFDLFDILSKNKYLRVLSFDRVDTIPDSIGNLIHLRYLNLSRSAVKKLPESLCNLCRLQTLKLEYCLELTVLPDGMHNLVNLQHLDTRSVPLKEMPKDMGKLKQLQFLSKFPVGKHKDNGIQELGGLLNLHGSFEIQKLENVVEANQARIARMIDKKHLESLLLEWSSGDDMVSDTQSERDILHSLQPHTGLKALRIEGYKGKIFPNWIGCSSYNTMTSVTLVSCKNCCMLPSLGQLQSLKSLWIQGFDQLKCIGDEFFKNEDDHSLHITPFPSLETLNFDDMPCWEVWYLPGSEAFPQLKKLRITLCRMLKGDMVNHVLMRIISSSLHVSKVRKLEIREDEAWGRDMSLEGDCLSIRGFESMVEYAFKAKIIHLLTSLQEIHISGCWSVVFLQHNCLSKSLQKLTIRRCRKLLVELKIEDSWDSLTSFSLDAFPNLKILEIQVCKNLESVSMSEPLHAALQRLTICQCPEFVSFTGEGLAAPNLTHLSVAGCSKLEALPHDMNTLLPNLHSLSIQGCPNICSLPESGLPPNLKELTVGGCEQQLRDLSWMGNLETLTHLKIDGSGCESIIRSYPEMGSLPHLPSLTTLKIWRFHNLKSLECNELLRLTSLQYLHISYCWRLEDMAGEKLPSSLLLLQIKGCPLLEEHCKNKHQHIWPKIEHIPTIQVYG 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60520g00003 1184 Gene3D - 316 399 IPR042197 -
Stsc60520g00003 1184 PRINTS Disease resistance protein signature 256 270 - -
Stsc60520g00003 1184 PRINTS Disease resistance protein signature 946 962 - -
Stsc60520g00003 1184 PRINTS Disease resistance protein signature 183 198 - -
Stsc60520g00003 1184 PRINTS Disease resistance protein signature 352 366 - -
Stsc60520g00003 1184 Pfam NB-ARC domain 163 378 IPR002182 GO:0043531
Stsc60520g00003 1184 FunFam Probable disease resistance protein At1g63360 401 488 - -
Stsc60520g00003 1184 Gene3D Ribonuclease Inhibitor 500 840 IPR032675 -
Stsc60520g00003 1184 Coils Coil 41 61 - -
Stsc60520g00003 1184 Gene3D - 150 308 IPR027417 -
Stsc60520g00003 1184 FunFam Probable disease resistance protein At1g61300 145 308 - -
Stsc60520g00003 1184 Pfam Rx N-terminal domain 38 97 IPR041118 -
Stsc60520g00003 1184 Gene3D - 400 488 IPR036388 -
Stsc60520g00003 1184 SUPERFAMILY L domain-like 474 942 - -
Stsc60520g00003 1184 Coils Coil 650 670 - -
Stsc60520g00003 1184 Gene3D - 15 132 - -
Stsc60520g00003 1184 PANTHER DISEASE RESISTANCE PROTEIN RP 45 822 IPR044974 GO:0006952
Stsc60520g00003 1184 Gene3D Ribonuclease Inhibitor 841 1019 IPR032675 -
Stsc60520g00003 1184 Gene3D Ribonuclease Inhibitor 1020 1173 IPR032675 -
Stsc60520g00003 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 414 IPR027417 -
Stsc60520g00003 1184 Coils Coil 118 138 - -
Stsc60520g00003 1184 SUPERFAMILY L domain-like 889 1174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60520g00003 Stsc-Chr60520 10728 15092 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60520g00003 184 374 WRKY Transcription Factor Family AT5G45050 27.228 5.61e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60520g00003 - - aip:107622623 1623.99