Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60518g00012 ATGTCTGAAGAAGATTTCCAATTTTCTTGTCATGGGGAGGTTATGCTCACACCAAGTGAGTTAGAGGAGTTGTTAACCCTAGTTAACCAACCCGAAAACTCTGACCCGGCTAGCCCTAGTTCCTTCGGTTCGCTAGGGTCGAACCGGGCGATTTACTCAACCAACGAGAGAAAACTCAGGCGCAAGCAATCGAACCGGGAGTCGGCGAGGAGGTCCAGGTGGAGAAAGAAGAGACATTTAGAGAACCTCACGAACCAACTGAACCGATTGAAAGTCGAGAACCGGGAATTAAAAAACCGGCTCGGTTTGACCACACAGCACAACATGCTACTATCCTGTGAGAATGAACACCTAAAATTTGAATCCGCAAACCTTGTAGCCAAACTCTTGGATGCATATCGGATCTTAGACACCATGCTTTCACAATAG 429 0.4709 MSEEDFQFSCHGEVMLTPSELEELLTLVNQPENSDPASPSSFGSLGSNRAIYSTNERKLRRKQSNRESARRSRWRKKRHLENLTNQLNRLKVENRELKNRLGLTTQHNMLLSCENEHLKFESANLVAKLLDAYRILDTMLSQ 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60518g00012 142 Gene3D - 55 127 - -
Stsc60518g00012 142 SMART brlzneu 53 117 IPR004827 GO:0003700|GO:0006355
Stsc60518g00012 142 MobiDBLite consensus disorder prediction 28 78 - -
Stsc60518g00012 142 SUPERFAMILY Leucine zipper domain 57 111 IPR046347 GO:0003700|GO:0006355
Stsc60518g00012 142 PANTHER BZIP TRANSCRIPTION FACTOR 44 41 139 - -
Stsc60518g00012 142 CDD bZIP_plant_GBF1 58 107 IPR045314 GO:0003700|GO:0006355
Stsc60518g00012 142 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Stsc60518g00012 142 MobiDBLite consensus disorder prediction 28 53 - -
Stsc60518g00012 142 Pfam bZIP transcription factor 57 108 IPR004827 GO:0003700|GO:0006355
Stsc60518g00012 142 FunFam BZIP transcription factor 55 106 - -
Stsc60518g00012 142 MobiDBLite consensus disorder prediction 64 78 - -
Stsc60518g00012 142 Coils Coil 73 100 - -
Stsc60518g00012 142 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 101 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60518g00012 Stsc-Chr60518 67038 67976 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60518g00012 13 136 bZIP Transcription Factor Family AT3G49760 39.062 1.76e-20 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc60518g00012 bZIP_1 1.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60518g00012 - - gmx:102668006 159.844