Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60518g00004 ATGGCGGTGTTATCGGACATAAACGACCCCGACGAGGCGATCGAATCGTCGCCGCCGCAGAAGGTCGGCGAAGAGAGGGAACTCAGTAACTGTGGGCTGAAGAAGAAGCTCGTCAAGCGTGGAATCCGTTACGAAACCCCTGAAGTCAAGGATCAAGTCACTGTGCACTGTGTTGGGATTTTGGAGGATAGAACCATGTTTGATTCTAGTAGGGATAAAAATCAACCTATAACGTTCACTCTTGGTCAAGGTGAACTGGCTGCTGGATTGGATCACCATGAAGAGCAAGGGACAAAAAGCCAGAGTGTTGCAACATCAGTTATCAATGATGAGGATTTTTCTGAGCTCATCAGAGCTGCTTCTGCTAGAACTCTGGGTAACAGAATTGACATGGATTTTGTCCTCAAACAGCAGCAGCATCAGAATCATCATGTTCATAATTCAAAAGGGTTACCAAATCTAGCAGTGTTGGTATGGCTAGAACATGATGAGGAGAATCCTTATGATTATTCAGAAGGTAGTGTCGGTGTTAGTGGTTGTTTTTGGAGTGCCTGA 555 0.4559 MAVLSDINDPDEAIESSPPQKVGEERELSNCGLKKKLVKRGIRYETPEVKDQVTVHCVGILEDRTMFDSSRDKNQPITFTLGQGELAAGLDHHEEQGTKSQSVATSVINDEDFSELIRAASARTLGNRIDMDFVLKQQQHQNHHVHNSKGLPNLAVLVWLEHDEENPYDYSEGSVGVSGCFWSA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60518g00004 184 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 17 91 - -
Stsc60518g00004 184 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 45 92 IPR001179 GO:0003755
Stsc60518g00004 184 Gene3D - 25 112 IPR046357 GO:0003755
Stsc60518g00004 184 MobiDBLite consensus disorder prediction 1 27 - -
Stsc60518g00004 184 SUPERFAMILY FKBP-like 28 91 - -
Stsc60518g00004 184 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 91 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60518g00004 Stsc-Chr60518 23550 26122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60518g00004 9 91 Calmodulin-binding Proteins AT5G48570 54.217 2.40e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60518g00004 K09571 - pop:7467250 112.849