Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60517g00006 ATGATAATATTGGGAACTGCAAAAATGGTTCAAGAAAAGTTGAAGAAAGGAGAGAAAAGAAGTAAGTTGAGGTTGCCACCAGGAAGAAGAGGATGGCCTTTGATTGGTGACAGCATCAATTGGGTCAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGGAAGATATTTTCTTGCAGCTTGTTTGGGAAATGGGCAGTGGTGTCTGCAGATCCAACCTTCAACCGGTTTGTGATGCAAAACGAAGGGAAACTATTCCGGTCGAGTTATCCGAAATCATTCAGAGATTTGGTTGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAGCAGAGGAAGCTGCATGGAATCGCCTCGAATATGATGCGACTCGAGAAGCTCAAGTTCCATTTCTTGAATGATATTCAGAAGGTCATGCTCCAAACTTTGAGCAATTTTGAGAACAACCAAGTCATTCTTCTCCAAGATGTTTGTAGAAAGGTAGCAATTAACTTAATGGTTAATCAGCTATTAGGGGTTTCAAGTGAGTCTCAAATCAATGAAATGGCTCAGTTGTTTTCTGATTTTGTTGATGGTTGTCTTTCAATTCCAATCAACACACCAGGATTTGCATACCACACTGCTATGAAGGCAAGGGAGAAAATCATAAACAAGATAAACAAGACCATAGAGGTGCACAGAAAAAATGGTTCTCCAACAGCAGGGAGTGGTGTGCTTGGAAGGCTGCTAGAGGAAGAAAGCTTGCCGGATGACGCCGTAGCAGACTTCATCATCAATCTTCTCTTCGCCGGGAACGAAACCACGACGAAAACAATGCTTTTTGCTGTCTATTTCCTTTCTCAATGTCCTCAAGCCATGAAGCAACTTCTGGATGAACAAGATTCTCTAAGGAGTAGTTCTGGAGAAGAATTTCTTACATGGCAGGATTACAAAGCAATGCCTTTCACTCAGTGTGTTATTGATGAAACACTTAGGCTTGGGGGAATTGCAATTTGGTTGATGAGAGAAGCAAAAGAAGACATTCAATACCAAGATTTTGTTATTCCAAAAGGATGCTTTGTAGTTCCATTTCTTTCAGCAGTCCATTTAGATGAGAATGTGTATAATGGAGCTCAAAACTTCAATCCATGGAGATGGATGGAACCTGAAAATGAGGAGAAGAGAAACTGGAGAACTAGTCCATTCTATGCTCCCTTTGGAGGAGGTGCAAGATTCTGTCCTGGAGCCGAGCTCGCTCGCCTTCAGATTGTGCTTTTTCTTCATTACTTTGTAACTACCTACAGATGGACACAGATGAAGGAAGACAGGATGTCCTTCTTTCCCTCTGCAAGATTAGTGAATGGCTTTGAAATCTGCTTAACAAGAAGACAAGATCATGAAGAAACAAGTTGA 1416 0.4153 MIILGTAKMVQEKLKKGEKRSKLRLPPGRRGWPLIGDSINWVNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPTFNRFVMQNEGKLFRSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMLQTLSNFENNQVILLQDVCRKVAINLMVNQLLGVSSESQINEMAQLFSDFVDGCLSIPINTPGFAYHTAMKAREKIINKINKTIEVHRKNGSPTAGSGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLSQCPQAMKQLLDEQDSLRSSSGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDIQYQDFVIPKGCFVVPFLSAVHLDENVYNGAQNFNPWRWMEPENEEKRNWRTSPFYAPFGGGARFCPGAELARLQIVLFLHYFVTTYRWTQMKEDRMSFFPSARLVNGFEICLTRRQDHEETS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60517g00006 471 CDD CYP90-like 58 463 - -
Stsc60517g00006 471 PRINTS E-class P450 group IV signature 321 337 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS E-class P450 group IV signature 370 388 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS E-class P450 group IV signature 398 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS E-class P450 group IV signature 262 288 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS E-class P450 group IV signature 52 75 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS E-class P450 group IV signature 414 432 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 SUPERFAMILY Cytochrome P450 20 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS P450 superfamily signature 271 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 PANTHER CYTOCHROME P450 26 21 440 - -
Stsc60517g00006 471 FunFam Cytochrome P450 720B1 family 14 464 - -
Stsc60517g00006 471 Pfam Cytochrome P450 26 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 Gene3D Cytochrome P450 14 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60517g00006 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60517g00006 Stsc-Chr60517 31399 33783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60517g00006 14 464 Cytochrome P450 AT1G73340 74.614 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60517g00006 - - gmx:100806921 854.358