Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60516g00005 ATGTATGTATTCTTTCTAAATCAGGTTGTTCCAGCAGAGGTAGTGGAGGCAATTCTCAGATCATGCAAAAGTGGAAATTTTGATTCAGCCAACAAGGAAGTGAACAATTTCATTGCAGAGGGATATCCAGCTTCTCAGATATTAACTCAGTTATTTGAGGCCATTCTTGAAGATGACATATCAGATGAACAGAAAGCAAGAATTGCCAAGAAGCTGGGAGAAGCAGATAAGTGTCTGGTTGATGGTGCTGATGAATACTTGCAGCTTCTTGACGTAGTCAGCACTACAATGCAAGCTTTTTGTAACATGCCAGAAGGATTTGCTTATGGGAGTTAG 336 0.4018 MYVFFLNQVVPAEVVEAILRSCKSGNFDSANKEVNNFIAEGYPASQILTQLFEAILEDDISDEQKARIAKKLGEADKCLVDGADEYLQLLDVVSTTMQAFCNMPEGFAYGS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60516g00005 111 Gene3D - 10 98 - -
Stsc60516g00005 111 Pfam Replication factor C C-terminal domain 11 94 IPR013748 -
Stsc60516g00005 111 FunFam Replication factor C subunit 4 10 98 - -
Stsc60516g00005 111 SUPERFAMILY post-AAA+ oligomerization domain-like 10 95 IPR008921 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60516g00005 9 107 Core DNA Replication Machinery Family AT1G21690 61.386 2.96e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60516g00005 K10755 - pvu:PHAVU_009G1281001 176.407