LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc60515g00015	ATGCACGGCAGAGAGAAGCGGTGTTTGGATTCGGCTTCAGCTGAAGAAGGTCAGCCTGATCGGAAGCGACCTGCTTTGGCTAGTGTAATTGTTGAGGCTCTGAAGGTGGACAGTTTGCAGAAGCTTTGTTCATCACTGGAGCCTATTCTTCGCAGAGTTGTAAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTTGGCCCTGCGAAGCTTACTGGAAGGTCTTCTCCAAAGCGCATTGAAGGCAGAGATGGCAAGAATTTACAATTGCACTTCAAAACTAGGCTATCTCTTCCTCTCTTTACTGGTGGAAAAGTGGAAGGCGAGCAAGGGTCTGCCATACATATTGTCTTAATTGATGCAAACACAGGGCAGATTGTCACATCAGGCCCAGAGTCATGTGCCAAATTAGATGTTATTGTGCTTGAAGGTGATTTCAATAATGAGGATGATGATAATTGGACTGAAGAAGACTTTGAGAGTCACGTTGTGAAAGAAAGGGAAGGAAAAAGGCCTCTTCTTGCTGGCGATCTGCAAGTCATGCTGAAGGATGGTGTAGGAACACTGGGCGAGCTCTCGTTTACAGATAATTCTAGCTGGATAAGAAGCAGGAAGTTCAGGTTGGGGCTGAAAGTTGCGTCAGGTTGCTGTGAGAGGATGCGTATTCGTGAAGCCAAAACAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCTCCTGCCTTGACTGATGAGGTATGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGGCTAAATAAAGCTGGAATATATACTGTTGAAGACTTCCTAAGACTTGTGGTCAGGGACCCTCAGAGATTACGGAATATTCTTGGGAGTGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAATCTTTATGTATACTATCCTGACGATGCAAGAAACGTGGGTGTTGTTTTCAATAACATCTATGAGCTAAGTGGCTTAATTGCCAATGACCAATATTATTCAGCTGACTCTCTTTCAGAGAGCCAAAAGGTCTATGTTGACACATTGGTGAAGAGGGCATACGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGATAAATTACAATCATAATAAGACTTTGGACACCTCTCATCCTCAGGCTCCAATGAGCTCTCATGAATATTCAAACTCCTTCCAACAGATTTCAGTCCCGAGTTTGCCAGTTCCAGTAAACACTGGGCAGCCTTCAGTGGATTCAGGAGTGACAGTTGGAGGTTATCATGATGGTACAGCTACCAGATTTCCGGTGCATACACAAAATATTAATTCTTGTATTCAATTTGATAATAATGCATGCCCGCTACAAAACCAGTTAAATGCTTCACACCAAGATCAGCTTCATAGAGATGACAGTATGGTAACCCATGGTCTGTTACAGTCAGCCACTCATGGCTTTCAGGCTGCAAGCAGTTCAAATCCTAGTAATAGAGGAATCGAGGAATTGTTGCCGGAGGAAGAGATTCGTATTAGAAGTCATGAGATGCTGGAAAATGAAGACATGCAGCATCTGCTCCGTATCTTTAATATGGGAGGCCAAAATCATGGTTCCCTTATTAATGCTCATGAAGATGGGTTTCCATATTCATCTGCATACATGGCTGCAAACGCAATGAGCTACAATTGTGATGACGAGCGAGGCTGTTCTTCTGGCAAAGCTGTTGTCGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTAGGAAGAAGGCCGCTGAGAGACGGGCACAGCTTGTTGAGTTGGATGACTCATAG	1860	0.4387	MHGREKRCLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGRSSPKRIEGRDGKNLQLHFKTRLSLPLFTGGKVEGEQGSAIHIVLIDANTGQIVTSGPESCAKLDVIVLEGDFNNEDDDNWTEEDFESHVVKEREGKRPLLAGDLQVMLKDGVGTLGELSFTDNSSWIRSRKFRLGLKVASGCCERMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGNLYVYYPDDARNVGVVFNNIYELSGLIANDQYYSADSLSESQKVYVDTLVKRAYDNWMHVIEYDGKSLINYNHNKTLDTSHPQAPMSSHEYSNSFQQISVPSLPVPVNTGQPSVDSGVTVGGYHDGTATRFPVHTQNINSCIQFDNNACPLQNQLNASHQDQLHRDDSMVTHGLLQSATHGFQAASSSNPSNRGIEELLPEEEIRIRSHEMLENEDMQHLLRIFNMGGQNHGSLINAHEDGFPYSSAYMAANAMSYNCDDERGCSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS	619

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc60515g00015	619	PANTHER	OS02G0177800 PROTEIN	5	533	IPR012416	GO:0005516
	Stsc60515g00015	619	Pfam	Calmodulin binding protein central domain	247	312	IPR046830	-
	Stsc60515g00015	619	Pfam	Calmodulin binding protein-like N-terminal domain	87	234	IPR046831	-
	Stsc60515g00015	619	MobiDBLite	consensus disorder prediction	1	22	-	-
	Stsc60515g00015	619	Pfam	Calmodulin binding protein C-terminal domain	318	379	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc60515g00015	Stsc-Chr60515	70187	73615	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc60515g00015	4	614	Calmodulin-binding Proteins	AT5G57580	61.838	0.0	764

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc60515g00015	-		-	gmx:100812605	1032.32