Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60514g00012 ATGCCTCGTGGTACACTTGAAGTTGTTTTGATCAGTGCCAAAGGCCTTGATGGCAAAGATTTTCTCGCAAACATTGATCCTTATGTGATTCTCTCATACCGTTCTCAGGAGCACAAAAGCACTGTGGCAGAAGGTGCTGGATCCAATCCACAATGGAATGAAAGCTTTCTTTTCACTATCTCTGACAGTTCTTGTGAGCTTAATCTGAAGCTCATGGATAAAGACAATTTTAGTCAAGATGATTTTCTTGGCGAGGCAACAATTCCTCTAGATGCAGTGTTTCATGAGGGTAGCCATCCAGAGACTTCTTACAATGTTGTGAAGGATCAAGAATACTGTGGAGAGATCAAGGTTGCTCTCAGTTTTACTGCTGAGAGAGGTGGTGCTCACAGGGAACACGGTGCACACGAAGAGAGTTATGGCGGATGGAATGAATCAGCTAGGGACTTTTAG 453 0.4371 MPRGTLEVVLISAKGLDGKDFLANIDPYVILSYRSQEHKSTVAEGAGSNPQWNESFLFTISDSSCELNLKLMDKDNFSQDDFLGEATIPLDAVFHEGSHPETSYNVVKDQEYCGEIKVALSFTAERGGAHREHGAHEESYGGWNESARDF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60514g00012 150 SMART C2_3c 5 102 IPR000008 -
Stsc60514g00012 150 PANTHER C2 DOMAIN-CONTAINING 1 126 - -
Stsc60514g00012 150 MobiDBLite consensus disorder prediction 130 150 - -
Stsc60514g00012 150 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 123 IPR035892 -
Stsc60514g00012 150 Gene3D C2 domain 2 124 IPR035892 -
Stsc60514g00012 150 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Stsc60514g00012 150 Pfam C2 domain 4 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60514g00012 Stsc-Chr60514 54385 56281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60514g00012 4 118 C2H2 Transcription Factor Family AT4G21160 29.565 7.24e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60514g00012 - - adu:107473142 279.256