Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60514g00002 ATGTCGGGGCAAACACAGCGTTTGAATGTTGTCCCCACGGTCACGATACTGGGACTGATGAAGGCTCGTTTGGTTGGAGCCACGCGTGGCCACGCTCTCCTAAAGAAGAAGAGCGATGCGCTTACTGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTTTACTAAGGAATCAATGGGGGACATCATGAAGACCTCTTCTTTTGCACTGACTGAGGCAAAGTATGTTGCTGGTGACAACATCAAGCATGTTGTGCTTGAGAATGTTCGAGAGGCCTCCCTCAAGGTCCGGTCCCGGCAGGAGAATGTTGCTGGCGTTAAGCTTCCCAAGTTCGAGTACACCAATGATGGTGAGGTTAACAAGAATGACCTCACTGGATTGGCCCGGGGTGGCCAGCAAGTGCAGCAGTGCCGAGCTGCTTACATCAAGGCAATTGAGGTCCTTGTGGAGCTTGCCTCTCTTCAAACATCCTTCCTCACACTAGACGAAGCGATTAAGACCACAAACCGGAGGGTTAATGCCCTTGAGAATGTGGTGAAGCCTAGGTTGGAGAATACCATTAGTTACATTAAGGGAGAGTTGGATGTGCTAGAAAGGGAGGATTTCTTTAGGTTGAAGAAGATCCAAGGATATAAGAAGCGGGAAATTGAGAAGCAGATGCAATCTGCAAAGTTGTTCGCTGAGGAACAGGTTGCTGAGAAGCTTGCGTTGCAGAGAGCACCTAGCAGCATTGCACAAGCAGCATTCTGGCGCCTAGGAGCCCAAACAACACTCAGGTTGGCGCCAAAGCAGTGCACATGCATCCAGCTCCAGCGCCCAAGCACCAAGCATGTCTCCCCTGTTCTGGCGCCTAGGCGCCCAGCAGCACTCCAGGGTCAGCCAGACTGGCGCCTAGGCGCCCATTCTCAGCACCAAAGAGCCAAGTCAAGCATCAAGCAACAGACCAAGCTGTTTCAGCGCCTAGGCGCCCAGTTCAATGCCTAG 984 0.5203 MSGQTQRLNVVPTVTILGLMKARLVGATRGHALLKKKSDALTVQFRQILKKIVFTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVNKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDVLEREDFFRLKKIQGYKKREIEKQMQSAKLFAEEQVAEKLALQRAPSSIAQAAFWRLGAQTTLRLAPKQCTCIQLQRPSTKHVSPVLAPRRPAALQGQPDWRLGAHSQHQRAKSSIKQQTKLFQRLGAQFNA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60514g00002 327 Gene3D - 1 199 - -
Stsc60514g00002 327 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Stsc60514g00002 327 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 234 IPR002699 GO:0046961
Stsc60514g00002 327 FunFam V-type proton ATPase subunit D 1 199 - -
Stsc60514g00002 327 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60514g00002 Stsc-Chr60514 15291 17629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60514g00002 1 255 Primary Pumps ATPases(2) AT3G58730 79.216 2.17e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60514g00002 K02149 - tcc:18612121 411.764