Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60513g00019 ATGTCGTCTCACCAAACCACCACCGACTCCGAGCTCGTCTGCGTCACCGGTGCAAACGGCTTCATCGGTTCATGGCTAGTCCACACCCTCCTCCACCACCACCCACGCTACACCGTCCACGCCACCGTCTTCCCCGGTTCCGATTACTCCCACCTCCTCACCCTCCATCCTGACGCCCATTCCCGCATCAAAATCTTCCCCGCCGACATCCTCGACGCCGCAGCCATATCCGCCGCAATCTCCGGCTGCTCCGGCGTATTCCACGTCGCCTCCCCCTGCACTCTCGACGACCCCGCCGACCCGGAGAATTCCCTCCTTCGCCCTGCCGTCCAAGGAACCCTAAAGGTCCTCGAGGCCGCGAAGCGAACCCAGGCGCGGCGCGTGGTTCTCACGTCCTCAATATCCGCCATGGTTCCGAACCCTAATTGGCCTCCAAACAAACCTTTCGACGAGGATTCCTGGACGGACGTCGAATTCTGCAAGAAGAGGGGGAAGTGGTACCCGGTGTCGAAGACAGCGGCGGAGAAGGCGGCGTGGGAGTTCGTGGAACAGCACGGCGGCGCTGACGTGGTGGCAGTGCTTCCGTCGACGTGTCTTGTGCACGTGAGGGACGTTGCTAGGGCTCAGGTTTTGATCTATGAGACTCCCTCTGCTGCTGCTAGATACTTGTGCACCAATGGCATATACCAATTCTCTAGCTTTGCAAAGATTCTCTCTGAATTGTACCCTGATTTTCCTATCTACAGGTTCCCTGAGGAAACTCAACCTGGCTTGACACCATGTAAAGATGCAGCAAAGAGGCTAATAGATTTGGGTTTTGTGTTCACCCCAGTTGAAGATGTTGTGCAAGAAGCAGTGGAGAGCCTCATAGATAAAGGTTTCTTGCAGAGAACACCCTCACATAATTAG 909 0.5644 MSSHQTTTDSELVCVTGANGFIGSWLVHTLLHHHPRYTVHATVFPGSDYSHLLTLHPDAHSRIKIFPADILDAAAISAAISGCSGVFHVASPCTLDDPADPENSLLRPAVQGTLKVLEAAKRTQARRVVLTSSISAMVPNPNWPPNKPFDEDSWTDVEFCKKRGKWYPVSKTAAEKAAWEFVEQHGGADVVAVLPSTCLVHVRDVARAQVLIYETPSAAARYLCTNGIYQFSSFAKILSELYPDFPIYRFPEETQPGLTPCKDAAKRLIDLGFVFTPVEDVVQEAVESLIDKGFLQRTPSHN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60513g00019 302 CDD FR_SDR_e 13 273 - -
Stsc60513g00019 302 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 286 - -
Stsc60513g00019 302 Pfam NAD dependent epimerase/dehydratase family 13 197 IPR001509 -
Stsc60513g00019 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 289 IPR036291 -
Stsc60513g00019 302 Gene3D - 198 302 - -
Stsc60513g00019 302 Gene3D - 2 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60513g00019 Stsc-Chr60513 95856 97750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60513g00019 11 295 Monolignol Biosynthesis Gene Families AT2G02400 58.621 1.27e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60513g00019 - - vra:106775739 416.387