Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60513g00016 ATGTTAGATTGTGACGAAGATCATGTCACCACTCAAGTTAAAGGAACAATGGGATACTTGGATCCGGAATACTACACGAGTCAGCAGGTGACTGAGAAAAGCGATGTCTATAGCTTCGGAGTGCTGATGTTAGAGCTGATAACCGGAAGAAAGCCGATCGAACGAGGGAAATACATTGTGAAAGTGGTGAGAAACTCAATTGACAAGACTAAGGACTTGTATGGCCTCCATGAACTCATAGACCGAGCAATCTTCGATGGCTCGGCGCTGAATGGTTTCGGGAAATTTGTTGATCTTGCAATGATGTGTCTTGAAGAATCAGGAGTTAATAGGCCTCCAATGAGTGATGTAGTGAAAGGGATTGAAATCATATTGCACTCTGCTGGTTTGGACCCTGCTGCTGAATCAGAACCATCAACTTCTTCGAGTTTTCGACATAATGAGGTAAGCATAGAGAGTTCCCATCAACCTTTCAGCAGTGAGTCCTTGTATTCAAGCTCAGAACATATTCAAGAAAACAAGGAGCCTAGTTAA 534 0.4307 MLDCDEDHVTTQVKGTMGYLDPEYYTSQQVTEKSDVYSFGVLMLELITGRKPIERGKYIVKVVRNSIDKTKDLYGLHELIDRAIFDGSALNGFGKFVDLAMMCLEESGVNRPPMSDVVKGIEIILHSAGLDPAAESEPSTSSSFRHNEVSIESSHQPFSSESLYSSSEHIQENKEPS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60513g00016 177 Gene3D Transferase(Phosphotransferase) domain 1 2 141 - -
Stsc60513g00016 177 SUPERFAMILY Protein kinase-like (PK-like) 7 165 IPR011009 -
Stsc60513g00016 177 PANTHER OS01G0253100 PROTEIN 9 122 - -
Stsc60513g00016 177 MobiDBLite consensus disorder prediction 134 171 - -
Stsc60513g00016 177 Pfam Protein kinase domain 10 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60513g00016 177 MobiDBLite consensus disorder prediction 132 177 - -
Stsc60513g00016 177 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60513g00016 Stsc-Chr60513 86195 87358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60513g00016 3 176 Receptor kinase-like Gene Family AT5G49760 53.714 1.82e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Stsc60513g00016 Pkinase 5.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60513g00016 - - aip:107638778 297.745