Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60513g00002 ATGGCGATGGAGGACGATATCTCTCCGGCCGACTCTCACGGCAGCAAAACCCCCGGCAAGGAGCAGCAGGCCGCCGGCGTCGGAATCCTGCTTCAGATCATGATGCTTGTCCTCTCCTTCGTCCTCGGCCACGTCCTCCGCCGCAAGAAGATTTACGTCATCCCCGAAGCCAGTGCTTCTCTTCTCATTGGCTTAATCGTTGGTGTTCTCGCCAACATCTCTGACACCGAAAATAGTATCAGGGCGTGGTTCAATTTTCACGAAGAGTTTTTCTTCCTCTTCTTGTTACCTCCTATCATATTTCAGTCTGGCTTCAGTCTTGCACCTAAACCTTTTTTCTCTAATTTTGGAGCAATTGTGACTTTTGCAATATTTGGCACATTTATAGCCTCAATAGTGACCGGTGTCTTAGTTTATCTTGGTGGGCTGGTCTTCCTCATGTATAGACTGCCTTTTGTCGAGTGCCTCATGTTTGGGGCTCTTATATCGGCGACTGATCCCGTTACTGTTTTATCAATATTTCAGGAGCTTGGCACAGATGTCAACCTATATGCTTTGGTTTTCGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATTGGTTAAGACTCATCCATCTGGACAAAATTTATTAATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGTTCAATGTCTGCAGGTGTTGGAGTGGGATTCATATCTGCTTTGCTTTTTAAGTATGCAGGATTGGATATTGACAACCTTCAGAACCTGGAGAGTTGTCTTTTTGTTCTATTTCCATATTTCTCATACATGCTTGCAGAAGGTCTTGGCTTGTCCGGTATTGTATCAATACTGTTTACAGGAATTGTCATGAAGCATTATTCATATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTCGAGTTGATATCTTCCTTAGCAGAGACCTTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCGGCGAATGTCTTCTCTTGTGCTTATCTGGTCAATTTGGCCAGACCTTCACATCGAAAGATACCTCCAAAACACCAAAAAGCACTTTGGTATAGTGGACTTCGGGGAGCAATGGCCTTTGCCCTTGCGTTGCAATCAGTTCATGATCTTCCGGAGGGACATGGACAGACCATCTTTACTGCAACAACAGCAATAGTTGTTTTGACGGTGTTATTGATTGGTGGGTCAACGGGTACCATGCTGGAAAATCTAGATGTGGTTGGTGACAATCATGGTGATAGCCCTTTGGCCACAGTGGGCACCATCACAAACAATTATGAGGAAAACAATGGTTATATTGCTCCTTCTTATGATGAAGAATCATCATCAGGAAGCAGATTCAAGATGAAGCTAAAAGAATTCCATAAGAGTGCTGGATCATTTACTGCAATAGATAAAAACTTTCTGACCCCATTCTTTACGAGTCAAAATGGAGATGAAGATGAAGATGAGCCGTTGACTTCAACAAGACCAGGATTTAACCGTCAGAACCCTTATTCATCGTGA 1614 0.4238 MAMEDDISPADSHGSKTPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVIPEASASLLIGLIVGVLANISDTENSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFIASIVTGVLVYLGGLVFLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVKTHPSGQNLLMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYSYSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLARPSHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLENLDVVGDNHGDSPLATVGTITNNYEENNGYIAPSYDEESSSGSRFKMKLKEFHKSAGSFTAIDKNFLTPFFTSQNGDEDEDEPLTSTRPGFNRQNPYSS 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60513g00002 537 MobiDBLite consensus disorder prediction 1 20 - -
Stsc60513g00002 537 NCBIfam sodium/hydrogen exchanger 3 33 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60513g00002 537 PANTHER SODIUM/HYDROGEN EXCHANGER 11 520 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Stsc60513g00002 537 PRINTS Na+/H+ exchanger signature 159 169 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60513g00002 537 PRINTS Na+/H+ exchanger signature 90 101 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60513g00002 537 PRINTS Na+/H+ exchanger signature 104 118 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60513g00002 537 PRINTS Na+/H+ exchanger signature 119 127 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Stsc60513g00002 537 Gene3D - 152 203 - -
Stsc60513g00002 537 Pfam Sodium/hydrogen exchanger family 35 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc60513g00002 537 MobiDBLite consensus disorder prediction 508 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60513g00002 Stsc-Chr60513 3098 9178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60513g00002 21 440 Antiporters AT3G05030 34.842 1.82e-55 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60513g00002 K14724 - gmx:100790830 878.241