Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60510g00016 ATGGAGAACCCTCATTCTACTTCTTCTTCTTCTTCTTTCTATGCCACTTCTTCTCCTTATGTGGTGATTGCATGCGATGCCACTAAGGATCGCAGTGAGTATGAGATTAAGCAAATCCTTGATAACTTAAGAAAAAGGGGTGATCTTCTATCGGCTGGTGACAGGTTGCTTGTTTTCTCTGTATTGCATAGGGTGCTTAACCCCATGGGGTACCAGACCATAGCATGCCCAGAGTCTATGGTTGGCACGAATTTTCGAGCATTGGAGGAACAAGTTAAAAAGAAAGCTGATGCATATGCCATTGAGCTTTTTTCAAGTCATGAAGAATTTAAAAATGCAGGGCTCAGCGTTGAAGTAAAAGTCACTGCAGGTTTTCCTCTTAGACAGGTTATTTTACAAGAGGTTACAAGATATAATGTATCATGGATTATACTTGATAGGCACCTTCGGCGCGACATGAGATTCTACCTTAACCGGATACCATTCAAGGTTGGATTGGTTAAAGATGACTTCTCTGTAGATATATGGAGATCCCATCATGCAAACATTTCACCCATCACTGAAACAAAGCCTGTCTATTCCTTTTACAAGTTTGTCTCTTTGGCAGATTGCCAAAGTATTGAAGACATTGAACAACAATCTATTATCTCTTTCAAGAGTTTTCCCCATATGTTCACTTCTTCAGATACTTCAGTCATGTTTAAGAGCTATACAAAGCATTCGAATGCTAACGTATGGGAGCAGAGTTCTTCACTAGATTCTGGATCTTTTAAGCATGAAAGATCAGCGTGGCAATTGTCTTTCATGATGGACGAAATGAAACGACATCATTTCACTTATAGCGCTAAATGGGACTATTTTGGTGCTAACTGCAAATCTCAAGAACCAAAATGGGGTTTAACTTTTACTAATCTTCCAGGCATAAGCATGAAAGGAGAACATAAACATACTGATAACTCTCACCTTGGCCAAAAGCAAGGAGGCTTTACAACACCACTTCTTTGTTCTGGCTGCAAGATACGGACAGAATTGTCTGTCAATGAGTCGACGAGATTTACCTATTCCGACATACAGCAGGCAACGAATGATTTTTCAAAGGATAACCTAATAGGTGAAGGTGGATTTGGTCATGTTTACAAGGGTGTTCTTAAAGATGGACAGCAAATTGCAGCAAAGGTAAGGAAAGACCAAAGTTCACAAGGCTTTTCTGAGTTTCATTCCGAGGTGCATGTCTTAAGCTTCGCTCGCCACAAGAATATAGTTATGCTATTGGGTTTTTGGTTCAAAGAAAAGAAAAATATTCTTATATATGAATATATCTGCAATAACTCCCTTGGTTGGCATTTATTTGACAAAAGTGCTCCCCTTCTTGAGTGGAAACAAAGGTATGCTATTGCCATTGGAACTGCAAAGGGTTTGCGTTTTCTGCATGAGGAATGCCGCGGTGGTCCTATTATTCATCGCGACATGCGACCATGCAATATACTTCTCACTCATGATTATGTCCCCATGCTAGCTGACTTTGGCCTTGCCAAATGGAGGACTGGTGATGGTACCATGCACACCAGGATAATGGGCACAATAGGATACCTTTCTCCAGAGTATGCTGAAACTGGTGTAGTTACTGAGCGAACAGATGTGTATGCTTTTGGTATCGTTTTGTTACAACTGATTTCAGGACACAAGGTCTCCAATTTCCGCAATCCAGAACAACAATCTATCAGACAATGGGCTATGCCAATCATTGAGTCGTTGACATTACACGAACTGATTGACACTCGTCTTGGGAATTCATATGATACGTATCAACTATATCTCATGGCCAAAACTGCATTCTTCTGCGTCCAAATAGAGCCTAATGACCGTCCTTCAATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAAAGCAAAGACTTCCACACACTAGGAGAGCATTTGTTGCCAAATTATAACAGCTAA 1959 0.4079 MENPHSTSSSSSFYATSSPYVVIACDATKDRSEYEIKQILDNLRKRGDLLSAGDRLLVFSVLHRVLNPMGYQTIACPESMVGTNFRALEEQVKKKADAYAIELFSSHEEFKNAGLSVEVKVTAGFPLRQVILQEVTRYNVSWIILDRHLRRDMRFYLNRIPFKVGLVKDDFSVDIWRSHHANISPITETKPVYSFYKFVSLADCQSIEDIEQQSIISFKSFPHMFTSSDTSVMFKSYTKHSNANVWEQSSSLDSGSFKHERSAWQLSFMMDEMKRHHFTYSAKWDYFGANCKSQEPKWGLTFTNLPGISMKGEHKHTDNSHLGQKQGGFTTPLLCSGCKIRTELSVNESTRFTYSDIQQATNDFSKDNLIGEGGFGHVYKGVLKDGQQIAAKVRKDQSSQGFSEFHSEVHVLSFARHKNIVMLLGFWFKEKKNILIYEYICNNSLGWHLFDKSAPLLEWKQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPCNILLTHDYVPMLADFGLAKWRTGDGTMHTRIMGTIGYLSPEYAETGVVTERTDVYAFGIVLLQLISGHKVSNFRNPEQQSIRQWAMPIIESLTLHELIDTRLGNSYDTYQLYLMAKTAFFCVQIEPNDRPSMGEVVRLLEGESKDFHTLGEHLLPNYNS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60510g00016 652 ProSiteProfiles Protein kinase domain profile. 364 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60510g00016 652 PANTHER OS01G0750732 PROTEIN 333 637 - -
Stsc60510g00016 652 ProSitePatterns Tyrosine protein kinases specific active-site signature. 485 497 IPR008266 GO:0004672|GO:0006468
Stsc60510g00016 652 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Stsc60510g00016 652 Gene3D Phosphorylase Kinase; domain 1 335 439 - -
Stsc60510g00016 652 Gene3D Transferase(Phosphotransferase) domain 1 441 643 - -
Stsc60510g00016 652 SUPERFAMILY Protein kinase-like (PK-like) 346 633 IPR011009 -
Stsc60510g00016 652 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 336 439 - -
Stsc60510g00016 652 Pfam Protein kinase domain 365 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60510g00016 Stsc-Chr60510 106134 112177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60510g00016 279 635 Trihelix Transcription Factor Family AT1G70460 41.322 4.46e-78 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Stsc60510g00016 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60510g00016 - - vun:114163670 803.897