Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60509g00015 ATGAGGAATCTTAGAGTACTTATTGTTGGGGATGCATATTTTCCTACAGGTCCTAAATATCTACCAAATAGTTTACGGGTTTTGGATTGGGTTGGATATCCATCAACATCTTTACCATCTGGTTTTAATCCTAGTGAGCTCTCCATACTCAGCGTGATTAGTAGCTGCCTTAAATTTGACAAATCACTCAAGATGTTTCAATCTTTGAGTTTTATGAATTTTGAAGATTGTAAATTGTTAACACAAGTCCCCTGCCTTTCTGGACTCTCAAACTTAAGGGCATTGTGTCTTGATAATTGCACCAATTTAGTTAAAGTTCATGATTCCGTTGGATTTCTTGAGAAACTCATTTTGTTGAGTGCTCAAGGATGCTCCAAGCTCCAAAGTTTTCTAAGTGCCATTAATTTGCCATATCTTGAGACACTAGACTTAAGGTGGTGCACAAGTCTTGAGATTTTCCCAGAAGTACTAGGAAAAATGGAAAATGTTCAAGAGGTTTATTTGGACCACACTGCCATAAAAGAATTGCCATTTTCAATCCACTGTCTGATTGGGCTTGAACGGTTGTTCCTGAGGAGATGCACAAATCTCAACCAACTTCCAGTCAGCATTAGTTTATTACCCAAACTTGAGGTGTTGATTGATTACAGGCGAAGAAGATATCGATTTTATGAAGAAGCCGTGATGTCAAAAGTGTTCTTCTCTCTGTGTTTAGAGGTGTCTCACCGTATAAAGGCGCTTGAAGCGTTTCTTCCCTTTACCAAAGCATATTGTATAACTATAAGTGACCGCAATATAATCCAAAAATCTGCACTAATAGAAATTGCTTTGCCTAAAGCACAAGTTCATTGTGGGAGTGGAAAATCTGTTTCGTTTGGGTTTCTTGAAAGATTTCCGAAGGTCATAGTCTTGCTTATTGTAGAGCCTTCTTTATACATTGACATCATGCATGGTTCAGTGTTTGAGTTCAGGTACACAGTGCTCATCAATGGAATCACCCAATTTAGTTCTTCATGTGACTATATGATTTCTGAGACTGCAGAGAAGCAGCAATTGTGTCTCTCTGTTTTTCTGGATGATCTTCAATGCTTGATTGAGGAGGGTGTTGTCAAAAGAGTGTTTTCTGATTCCAAGCAAGAATGGAATCGCGTTGAGGTTTCATGCGAGCTAAAATATCACGTGCCATATGATCCTAGGCATGTAAATAAAGGCCAAATGAGAAGCATAGAAGGAACAATAAAACAAAGCACCCTTCATGTGGACAAGCAGGATGTCCATTTTACATATCCTGATGGTGAAGATGCATGCCATTTTTCATCCTGCTATTGCCATCTTATTTTCGGCCGCAACTACCCAACTATGTTATGCTGTAGAAGCTATGAAGCACTTCATATCTTTAGAGGAGCTTAG 1410 0.3879 MRNLRVLIVGDAYFPTGPKYLPNSLRVLDWVGYPSTSLPSGFNPSELSILSVISSCLKFDKSLKMFQSLSFMNFEDCKLLTQVPCLSGLSNLRALCLDNCTNLVKVHDSVGFLEKLILLSAQGCSKLQSFLSAINLPYLETLDLRWCTSLEIFPEVLGKMENVQEVYLDHTAIKELPFSIHCLIGLERLFLRRCTNLNQLPVSISLLPKLEVLIDYRRRRYRFYEEAVMSKVFFSLCLEVSHRIKALEAFLPFTKAYCITISDRNIIQKSALIEIALPKAQVHCGSGKSVSFGFLERFPKVIVLLIVEPSLYIDIMHGSVFEFRYTVLINGITQFSSSCDYMISETAEKQQLCLSVFLDDLQCLIEEGVVKRVFSDSKQEWNRVEVSCELKYHVPYDPRHVNKGQMRSIEGTIKQSTLHVDKQDVHFTYPDGEDACHFSSCYCHLIFGRNYPTMLCCRSYEALHIFRGA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60509g00015 469 SUPERFAMILY L domain-like 2 214 - -
Stsc60509g00015 469 Gene3D Ribonuclease Inhibitor 1 133 IPR032675 -
Stsc60509g00015 469 Gene3D Ribonuclease Inhibitor 134 218 IPR032675 -
Stsc60509g00015 469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 20 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60509g00015 Stsc-Chr60509 93457 95518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60509g00015 14 213 WRKY Transcription Factor Family AT4G12020 39.234 2.65e-31 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60509g00015 - - ahf:112736348 625.165