Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60506g00002 ATGAAAACTCATCAACCAAAGCTCAAGACACAACTCTTCTCCTGCGGCTTCTTCCGCCACTGTGCCCAAACCGTTCTCAGCCCCACCGGAAACACCCTCCACCCACCACCTCTCCCTGTCACTCCTCCACCACCGCCACCACCACTTCCTCACCACCTTCGCAACTCATGCGAGTCCTCAACCTCCTCTTCTTCCTCCACAACCTCCCAAAGCTTCACCCAATGGAGGTTCTCTCTCCCCACAACACCCTCCACCACCACCACTGCTCCTACGGCACAACCACCACCACCGCCACCACCACCGCTTCTACTTCCCAACAACCTCGAAGAACTCTTCCACCTCTCCGAGCTCCAACTCACAACCGGTTCTGAATCCGACCGCGCAGCAGCCATCCACCTTCTAGAACGTTCTCTCGTCCCAAACCCTCCTCAGGACCAACCCCCATGCCCACCCGCCCTCCTCCGCCACGTCATCCGCCACCTCACCGCCACAACCAAGATCCTCTTCGCCCTCTGCCTCTCCCCCTCCAACCGCCGCCTCGCCGTCGAGGCCGGCGCCGTCGCAGCCATCGTCGAGTCCGCCCCAGACCTCGACGGAGCACCCGCCGAACGCGCCCTCGCCGCCCTGGAACTGATGTGCACGGTGGCGGAGGGAGCCGAAGCCGTGAGGGCTCACGCGCTGTCAGTTCCAGTGATGGTGACGATGATGGGTCGGACGGGTGCTCGCGGGAAGGAGTACGCCATCGGAGTGCTTGCCGTGGTGTACGGCAGTTCTACGGGCGCGGAGAGAGAAACGGCGGCTCCGCCGGAAGAAGTGGCGCGTGCAGTGGAGCTTGCTCTTCAGGGAGAGTGCAGCGCGAGAGGTAGAAGAAAAGGAAGTCAACTTTTGAAGACTCTTGAGCTTCTTTCTACTGATTCAAATTATGAGTCTCCTCCTCCTCCTCATCATCATCATCACTCTCACATCAATAATCAACTTCAACCACCTAATTGA 993 0.5962 MKTHQPKLKTQLFSCGFFRHCAQTVLSPTGNTLHPPPLPVTPPPPPPPLPHHLRNSCESSTSSSSSTTSQSFTQWRFSLPTTPSTTTTAPTAQPPPPPPPPLLLPNNLEELFHLSELQLTTGSESDRAAAIHLLERSLVPNPPQDQPPCPPALLRHVIRHLTATTKILFALCLSPSNRRLAVEAGAVAAIVESAPDLDGAPAERALAALELMCTVAEGAEAVRAHALSVPVMVTMMGRTGARGKEYAIGVLAVVYGSSTGAERETAAPPEEVARAVELALQGECSARGRRKGSQLLKTLELLSTDSNYESPPPPHHHHHSHINNQLQPPN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60506g00002 330 MobiDBLite consensus disorder prediction 54 88 - -
Stsc60506g00002 330 Gene3D - 119 301 IPR011989 -
Stsc60506g00002 330 SUPERFAMILY ARM repeat 123 254 IPR016024 -
Stsc60506g00002 330 MobiDBLite consensus disorder prediction 29 102 - -
Stsc60506g00002 330 MobiDBLite consensus disorder prediction 304 330 - -
Stsc60506g00002 330 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 304 - -
Stsc60506g00002 330 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60506g00002 Stsc-Chr60506 21786 22778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60506g00002 159 323 U-box Gene Family AT1G49780 34.337 3.10e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60506g00002 - - adu:107470738 392.119