Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00019 AAGCAAGCCAAATCTAAATTCATTCCAAAAATGGTAACAATCAAAGCATCTTATGTAGTTACTCCAAAAGATGAAACTCCAAAGGGTGTTTTCTGCTTATCAGAGAGTGACCAAATCTGGCGTTGGAGTCATTCAACCACAGTCTATGTTTACAATAACAAAAACAATGTGAATGTGATGAATTTGAATGAGCTTGTTCAAAGAATGAGAGAATCCCTTAGCCAGATTCTAGTTCACTACTATCCCTTACGTGGCAGGTTGAATTGGATACAAGGTGGCCGTTTAAAACTTGATTGTAACGCAAAGGGAGCCATGTTGTTTGAAGCTGAATCCACTAAATCAATGGCTGAATATGGAGAGTTCTCACCGAATGATGATGCCATCAAAGAACTCATACCAAAGCTTGATTACTCTCAACCCATTCAGGACATTCCTTTGTTTCTGGCACAAGTCACAAAGTTCCATGGTGGTGGCTTTCTCTCATCCAATGAGTGA 495 0.3939 KQAKSKFIPKMVTIKASYVVTPKDETPKGVFCLSESDQIWRWSHSTTVYVYNNKNNVNVMNLNELVQRMRESLSQILVHYYPLRGRLNWIQGGRLKLDCNAKGAMLFEAESTKSMAEYGEFSPNDDAIKELIPKLDYSQPIQDIPLFLAQVTKFHGGGFLSSNE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00019 164 Pfam Transferase family 11 160 - -
Stsc60504g00019 164 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 159 - -
Stsc60504g00019 164 Gene3D - 11 162 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00019 Stsc-Chr60504 119381 119876 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00019 12 158 Monolignol Biosynthesis Gene Families AT5G48930 34.014 2.26e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00019 K13065 - qsa:O6P43_022127 157.532