Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00018 ATGGCCCGCGAGCTCGACAAAAATCAACCAACCTTAGTGAAGACCATCGTTGATATTCGCAATAAGGTGAATCCTCCTCTGCCCAAAACCTATTTTGGGAATGCTTTGGCTTCCACCGTGACATCAACATGTTGTGTTGGAGATATCATAAAAGAGCGGGTGAGTTATGGTGCACAAAGGATAAGAGAAGCAGTGGAAAGGGCTTCCAATGAAGAGTACATAAGATCGCAACTGGAGTTTGTAGCGCGACAAGAGCAAATGGATATGATTAGGACTCAGTTCTTGGAAAAAGGAGAGTACAGAGCAGATGTGTCCTTTGGAAACCCCAACATTATGCTTGGAAGTTGGTTGCGGATGCCGATGTATGATGCAGATTTTGGTTGGGGAAAGCCAGATTATTTTGGTCCTGGTGGTGTGTGTCCCTTTGATAATGGGATTATTGCTCCAACCCCACATGGAGATGGCTCCATTGTTATCTTCATGTATTTTCAGATGGCGCACATGAAGAATTTCATCAAGCTCTTTTGGCATAATTTATGA 540 0.437 MARELDKNQPTLVKTIVDIRNKVNPPLPKTYFGNALASTVTSTCCVGDIIKERVSYGAQRIREAVERASNEEYIRSQLEFVARQEQMDMIRTQFLEKGEYRADVSFGNPNIMLGSWLRMPMYDADFGWGKPDYFGPGGVCPFDNGIIAPTPHGDGSIVIFMYFQMAHMKNFIKLFWHNL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00018 179 Pfam Transferase family 2 172 - -
Stsc60504g00018 179 Gene3D - 1 176 IPR023213 -
Stsc60504g00018 179 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00018 Stsc-Chr60504 118242 119114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00018 2 176 Monolignol Biosynthesis Gene Families AT5G48930 33.523 4.94e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00018 K13065 - gmx:100788434 199.519