Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00017 ATGGCATCAGTCATAGCATCTTATGTAGTTACTCCAAAAGAAGAAACTCCCAAGGGTCTTTTCTGCTTAACAGATAGTGACCAAATCAATCCTTGGAGTCATGTTTCCACAATCTATGTTTACAAAAACAAGAACAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGACTCTCTTAGCCACATTCTGGTTCACTACTATCCATTATCTGGACGGTTGAATTGGACAGAAGTTGGGCGTTTGCAAATGGATTGTAACGCCAAAGGAGTCATCCTGATTCAAGCTGAATCCAAGAAAACAATGGATGAATATGGAGACTTCTCACCAAACGATGATGCCATCAAAGAACTCATACCAAACCTTGATTACTCTCAACCCATGGAGGACCTTCCTCTGTTGCTTGCACAAGTCACAAAGTTCCATGGTGATGGCAATGCCATTGCTATAGCAATTTCCATATCTCATACAATGGGTGATGCGGTTTCAAGCGTTCACTTCATCAACTCATGGGCCAAACTCACCAGGGGAGACTCATTGGACCAAAATGAATTGCCATTTCTGGACAGAACTGTGTTCACAACCTCTCGGCTGCCGGCGGTGCGGCATTTCGACCACCCGGAGTTTAATCCTCCACCAGTCATCCTTGGAAGAACAAACAACATTGAAGAACAAAAGAAGGAGACAAGGTTTGCATTTTTTAAGCTAACAGCAGAACAGGTGGATAAACTGAAGCAAAGGGCAAATACTGGTTATTCTGATGAATCCAAGCAGAGAGCCTACAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCCCGTGAGCTTGACAAAAATCAACCAACCTTAGTGAAGACGGCTGTTGATGTTCGCAACAAGGTGAATCCTCCTCTGCCAAAAAACTATTTTGGGAATGGTTTGGTTACCACAGTGACAACAACATGCTGCGTTGGAGATATGATATCAGAACCGGTGAGTTATGGTGCAAAAAGGATAAGAGAAGCAGTGCAAAGGGTTGCAAATGACGAATACATAAGATCACATCTGGAGTTTGTAGCGCGACAAGAGACAATGGATATGCTTAGGACTCAGTCCGTGGAAGAGTGTAGAGCAGATGTGTCCTTCTCTAGGGACCCCAACATTGTGCTTGGAAGTTGGTTGCAGTTGCCATTCTATGAAGCAGATTTTGGTTGGGGAAAGCCACATCATTTCGGTCCAGGCATTGTGCCTCCCATTGATATTGGAATTATGGCTCCAACTCCAGATGCGGATGGCTCCATTGTTATCTTCATGAATTTTCAGATAGCGCACATGCAGAATTTCGTCAAGCACTTTTGGGATAATTTATGA 1365 0.4344 MASVIASYVVTPKEETPKGLFCLTDSDQINPWSHVSTIYVYKNKNNVNVNELVQRMRDSLSHILVHYYPLSGRLNWTEVGRLQMDCNAKGVILIQAESKKTMDEYGDFSPNDDAIKELIPNLDYSQPMEDLPLLLAQVTKFHGDGNAIAIAISISHTMGDAVSSVHFINSWAKLTRGDSLDQNELPFLDRTVFTTSRLPAVRHFDHPEFNPPPVILGRTNNIEEQKKETRFAFFKLTAEQVDKLKQRANTGYSDESKQRAYSRFEAIGAHIWRCACMARELDKNQPTLVKTAVDVRNKVNPPLPKNYFGNGLVTTVTTTCCVGDMISEPVSYGAKRIREAVQRVANDEYIRSHLEFVARQETMDMLRTQSVEECRADVSFSRDPNIVLGSWLQLPFYEADFGWGKPHHFGPGIVPPIDIGIMAPTPDADGSIVIFMNFQIAHMQNFVKHFWDNL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00017 454 Gene3D - 2 211 IPR023213 -
Stsc60504g00017 454 Gene3D - 218 453 IPR023213 -
Stsc60504g00017 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 437 - -
Stsc60504g00017 454 Pfam Transferase family 4 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00017 Stsc-Chr60504 114076 115656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00017 7 452 Monolignol Biosynthesis Gene Families AT5G48930 33.333 2.09e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00017 K13065 - gmx:100779814 442.195