Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00015 ATGGCAACAATTATAGCATCTCACGTAGTTACTCCAAAAGAAGAAACTCCAAAAGGTCTTTTCTGCTTAACAGAGAGTGACCAAATCAATCGTTGGAGTCATATCACCACAATCTATGTTTACAAAAACAACAACAATGTGAATGTGAATGAGCTTGTTCAAAGAATGAGAGACTCTCTTAGCCAAATTCTGGTTCACTACTATCCGTTATCCGGACGGTTGAATTGGACAAAATGTGGCCGTTTGCAAATGGATTGTAACGCCAAAGGAGCCATCCTGATTCAAGCTGAATCCAAGAAAACAATGGCTGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTCATACCAAAGCTTGATATCTCTCAACCCATAGAGGAGCTTCCTCTATTTCTGGTACAAGTCACAAAGTTCCATGGTGATGGCAATGACATTGCTATAGCAATTACCATATCTCATGCAATAAGCGATGGGATTTCAAGCATTCACTTCATCAACTCATGGGCCAAACTCACCAGGGGAGACTCATTGGATCCAAATGAATTGCCATTTCTCGACCGAATGGTGTTCACTTCCTGTAGCCTGCCGGCGTTGCAGCGTTTCGACCACCCAGAGTTTAATCCTCCACCACTCATTCTTGGAAGAACAGACAGCAGTGAAGAACAAAAGAAGAAGACAAGGTTCGAATTTTTGAAGTTAACAGCAGAACAGGTGCATAAACTGAAGCAAAGGGCAAATACTGGTTATTCTGGTGAATCCCAGGAGAGAGCCTACAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCCCGTGAGCTTGACACAAATCAACCAACCTTAGTGAAGACAGTCGTTGATGTTCGCAACAAGGTGAATCCTCCTCTGCCAAAAAACTATTTTGGGAATGGTTTGGTTACCGCGGTGACAGCAACATGCTGTGTTGGAGATATGATATCAGAACCGGTAAGTTATGGTGCAAAAAGAATAAGAGAAGCAGTGGAAAGGGTTTCAAATGACGAGTATATAAGATCACAATTGGAGTTTGTAGCGCGACAAGAGACAATGGATATGCTTAGGACTGAGTCCTTGGAAGAGTGTAGAGCAGATTATTTCTTCCCTGGGAACCCCAACATTGTGCTTGGATGTTGGTTGCATTTGCCATTCTATGAAGCAGATTTTGGTTGGGGAAAGCCATATCATTTCGGTCCAACCATTGTGCCTCACATTGATCTTGGAATTCTGGCTCCAACTCCAGATGCGGATGGCTCCATTGTTATCTTCATGAATTTTCAGATGGCACACATGGACAATTTCATCAAGTTCTTTTGGGATAATTTATGA 1365 0.4242 MATIIASHVVTPKEETPKGLFCLTESDQINRWSHITTIYVYKNNNNVNVNELVQRMRDSLSQILVHYYPLSGRLNWTKCGRLQMDCNAKGAILIQAESKKTMAEYGDFSPNDDAIKELIPKLDISQPIEELPLFLVQVTKFHGDGNDIAIAITISHAISDGISSIHFINSWAKLTRGDSLDPNELPFLDRMVFTSCSLPALQRFDHPEFNPPPLILGRTDSSEEQKKKTRFEFLKLTAEQVHKLKQRANTGYSGESQERAYSRFEAIGAHIWRCACMARELDTNQPTLVKTVVDVRNKVNPPLPKNYFGNGLVTAVTATCCVGDMISEPVSYGAKRIREAVERVSNDEYIRSQLEFVARQETMDMLRTESLEECRADYFFPGNPNIVLGCWLHLPFYEADFGWGKPYHFGPTIVPHIDLGILAPTPDADGSIVIFMNFQMAHMDNFIKFFWDNL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00015 454 Gene3D - 217 451 IPR023213 -
Stsc60504g00015 454 SUPERFAMILY CoA-dependent acyltransferases 53 189 - -
Stsc60504g00015 454 Gene3D - 2 211 IPR023213 -
Stsc60504g00015 454 Pfam Transferase family 3 447 - -
Stsc60504g00015 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00015 Stsc-Chr60504 98971 100944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00015 7 452 Monolignol Biosynthesis Gene Families AT5G48930 32.662 2.64e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00015 K13065 - gmx:100779814 458.759