Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00014 ATGGTATCAATCAAAGCATCTTATACAGTTACTCCAAAAGATGAAACTCCAAAGGGTCTTTTCTGTTTATCAGAGAGTGACCAAATGTGGCGTTGGAGTCACTCAAACACAATGTATGTTTACCATAACAACAACAATCTGAATGTTGATGAGCTTGTTCAAAGAATGAGAGACTCCCTTAGTCAGATTTTAGTTCACTACTATCCGTTATGCGGACGGTTGAGTTGGACAAAAGGTAGCCGTCTGGAGATGGACTGTAACGCAAAGGGAGCCATGCTGCTTCACGCTGAATCCACCAAAACATTGGCTGAATATGGAGAGTTCTCGCCAAATGATGATGCCATCAAAGAACTCATTCCAAAGATTGATTACTCTCAACCCATAGAGGACATTCCTCTGTTGCTTGCACAAGTCACCAAGTTCGGTGGCCATGGCAATGCCGTTGCTATAGCAACCGCCATATCTCATCCAATGAGTGATGGGGTTTCAAGCATTCAGTTCATCAACTCATGGGCCAAACTCACCAGAGGAGATGCATTGGGCCCAGATGAATTGCCATTTCTCGACCGGATGGTGTTCACGGCTTCTAGTTTGCCGGCGCTGCGGCGCTTCGACCACCCGGAGTTTAAGCGTCCACCAATAGTCCTTGGAAGAACAGACAACATTGAAGAACAAAAGAAGAAGACGAGGGCTACAACGTTGAAGCTAACAGCAGAACAAGTGCAGAAATTGAGACAAAAGGCAAGTATTGGTGATTCTGAATCGAAGCAGAGACCCGTGAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCCCGTGAGCATGACAAGAATCAACCAACCTTAGCAAAGACCGTCGTTGATGTTCGCAGCAAGGTGAATCCTCCTCTACCGAAAAACTATTTTGGAAATGCTTTGGCCTCCACAGTGACATCAACATGCTGCGTTGGAGATATCATATCAGAGCCGTTGGGTTATACTGCAAAAATGATAAGAGAAGCAGTGGAAAGGGTTTCAAATGACGAGTATATAAGATCACAATTGGAGTATGTAGCGGGACAAGAGGGAATGGATACGATCAGGACTCCGTTCTTGGAAAAAGGAGTGTACAGCCCAAATGTGTCCTTCTATGGGAACCCTAACATTTTTCTTGGAAGTTGGACACGTATGCCCTTTTACGAAGCAGATTTTGGCTGGGGAAAGCCAGATTATTTCGGTCCAACCGGTGTGTCTCCGTTCGATATCGGAATTGTGGCTCCTAGCCCTGATGAGGATGGCTCCGTTGTTGTTTTACTGTGTTTTCAGATACAACACATGGAGAATTTCATCAAGCACTTTTGGGATATATAA 1365 0.4491 MVSIKASYTVTPKDETPKGLFCLSESDQMWRWSHSNTMYVYHNNNNLNVDELVQRMRDSLSQILVHYYPLCGRLSWTKGSRLEMDCNAKGAMLLHAESTKTLAEYGEFSPNDDAIKELIPKIDYSQPIEDIPLLLAQVTKFGGHGNAVAIATAISHPMSDGVSSIQFINSWAKLTRGDALGPDELPFLDRMVFTASSLPALRRFDHPEFKRPPIVLGRTDNIEEQKKKTRATTLKLTAEQVQKLRQKASIGDSESKQRPVSRFEAIGAHIWRCACMAREHDKNQPTLAKTVVDVRSKVNPPLPKNYFGNALASTVTSTCCVGDIISEPLGYTAKMIREAVERVSNDEYIRSQLEYVAGQEGMDTIRTPFLEKGVYSPNVSFYGNPNIFLGSWTRMPFYEADFGWGKPDYFGPTGVSPFDIGIVAPSPDEDGSVVVLLCFQIQHMENFIKHFWDI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00014 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
Stsc60504g00014 454 Pfam Transferase family 1 451 - -
Stsc60504g00014 454 Gene3D - 218 454 IPR023213 -
Stsc60504g00014 454 Gene3D - 1 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00014 Stsc-Chr60504 83334 86019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00014 2 454 Monolignol Biosynthesis Gene Families AT5G48930 32.599 8.36e-78 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00014 K13065 - gmx:100778626 462.225