Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00012 ATGGTATCAATCAAAGCATCTTATGTAGTTGCTCCAAAAGATGAAACACCAAAGGGTCATTTCTTCTTATCAGAGAGTGACCAAATCTGTCGTTGGAGTCATTCAACCACAATCTATGTTTACCATAACAAGAACAATTTGAATGTGAATGAGCTTGTTCAAAGAATGAAAGAGTCCCTTAGCCACATTCTGGTTCACTACTATCCCTTATGTGGACGGTTGTATTGGACGCAAGGTGGCCGTTTGAAAATGGATTGTAACGGAAAGGGAGCCATGCTGCTTCAAGCTGAATCCACAAAATCAATGGATGAATATGGAGACTTCTCACCAAACGATGATAACATCAAAGAACTCATACCAAACCTTGATTACTCTCAACCCATTCAGGACCTTCCTCTGTTTCTCGCACAAGTCACAAAGTTCCATGGTGGTGGGAATGACGTTGCCATTGGAATTGCCTTGTCTCATCCCATGAGCGATGGGGTTTCAAGCATTCAATTCATCAACTCATGGGCCAAACTCACCAGAGGAGATGCATTGGGCCCAGATGAATTTCCATTTCTCGACCGGATGGTGTTCACAGCCTCTAGCCTGCCGGCACTGCGGCGTTTCGACCACCCGGAGTTTAAGCGTCCACCAATAGTCCTTGGAAGAACAGACAACATTGAAGAACAAAAGAAGAAGACAAGGGCTACAACGTTGAAGCTAAGAGCAGAACAAGTGCAGAAATTGAGGCAAAAGGCAAATATTGGTGATTCTGAATCTAAGCAGAGACCTGTCAGCAGATTTGAAGCCATTGGAGCTCATATATGGCGATGTGCTTGTATGGCCCGTGAGCATGACAAGAATCAACCAACCTTAGCCAAGACAGTCGTTGATGTTCGCAGCAAGGTAAATCCTCCTCTGCCGAAAAACTACTTTGGGAATGCTTTGGCTTCCACAGTGACATCAACATGTTGCGTTGGAGATATCATATCAGAGCCGCTGGGTTATACTGCAAAAAAGATAAGAGAAGCAGTGGAAAGGGTTTCAAATGATGAGTATATAAGATCACAACTGGAGTATGTAGCGGGACAAGAGGGAATGGATACGATCAGGACTCCATTCTTGGAAAAAGGGGTGTACAACGCAAATGTGTCCTTCTATGGGAACCCTAACATTTTTCTTATAAGTTGGACGCGTATGCCTTTTTACGAAGCAGATTTTGGCTGGGGAAAGCCAGATTATTTCGGTCCAACCGGCGTGTCTCCGTTCGATATTGGAATTGTGGCTCCAAGCCCTGATGAGGATGGCTCCGATATTGTCTTACTGTGTTTTCAGATAGAACACATGCAGAATTTCATCAAGCACTTTTGGGATATATAA 1365 0.4396 MVSIKASYVVAPKDETPKGHFFLSESDQICRWSHSTTIYVYHNKNNLNVNELVQRMKESLSHILVHYYPLCGRLYWTQGGRLKMDCNGKGAMLLQAESTKSMDEYGDFSPNDDNIKELIPNLDYSQPIQDLPLFLAQVTKFHGGGNDVAIGIALSHPMSDGVSSIQFINSWAKLTRGDALGPDEFPFLDRMVFTASSLPALRRFDHPEFKRPPIVLGRTDNIEEQKKKTRATTLKLRAEQVQKLRQKANIGDSESKQRPVSRFEAIGAHIWRCACMAREHDKNQPTLAKTVVDVRSKVNPPLPKNYFGNALASTVTSTCCVGDIISEPLGYTAKKIREAVERVSNDEYIRSQLEYVAGQEGMDTIRTPFLEKGVYNANVSFYGNPNIFLISWTRMPFYEADFGWGKPDYFGPTGVSPFDIGIVAPSPDEDGSDIVLLCFQIEHMQNFIKHFWDI 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00012 454 Pfam Transferase family 1 451 - -
Stsc60504g00012 454 Gene3D - 1 211 IPR023213 -
Stsc60504g00012 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 436 - -
Stsc60504g00012 454 Gene3D - 218 454 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00012 Stsc-Chr60504 68584 71026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00012 2 454 Monolignol Biosynthesis Gene Families AT5G48930 34.141 1.56e-84 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00012 K13065 - gmx:100778626 470.7