Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00011 ATGGATATGATTAGGACTCAGTTTTTGGGAAAAGAAGAGTATAAAGCAAATGTGTCCTTCTTTGGGAACCCTAACATTGTGCTTGGAAGTTGGTTGCAGATGCCATCGTATGAAGCAGATTTTGGTTTGGGAAAGCCACATTATTTCGGTCCAAGCGCTATGGCACACATGCAGAATTTCATCAAGCTCTTTTGGGATAATTTATGA 207 0.401 MDMIRTQFLGKEEYKANVSFFGNPNIVLGSWLQMPSYEADFGLGKPHYFGPSAMAHMQNFIKLFWDNL 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00011 68 Gene3D - 2 65 IPR023213 -
Stsc60504g00011 68 Pfam Transferase family 19 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00011 Stsc-Chr60504 64074 64358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00011 24 56 Monolignol Biosynthesis Gene Families AT5G48930 42.424 9.71e-06 39.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00011 K13065 - aip:107646786 73.9442