Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00010 ATGGTATCAATCAAAGCATCTTATGTAGTTACTCCAAAAGAAGAAACACCAAAGGGTCTTTTCTGCTTATCAGAGAGTGACCAAATCTGGCGTTGGAGTCACACAGCCACAATCTATGTTTACAATAACAACAACAATGATGTGAATATGAATGTGGATGAGCTTGTTCAAAGAATGAGAGACTCTCTTAGCCACCTTCTGGTTCACTACTATCCGTTATGCGGACGGTTGAGTTGGACAGAAGGTGGCCGTTTGCAAATGGATTGCAACACAAAGGGAGTCATCTTGATTCAAGCTGAATCCACCAAATCAATTGATGAATATGGAGAGTTCTCACCAAATGATGATGCCATCAAAGAACTCATACCAAACCTTGATTACTCTAAACCCATAGAGGACATTCCTCTGTTTCTTGCACAAGTCACGAAGTTCCATGGTGATGGCAATGCCATTGCCATAGCAACCGCCATATCTCATACAATGAGTGATGGGGTTTCACGCACTCAGTTCAACAACTCATGGGCCAAACTCGCCAGAGGAGGTGCATTGGGCCCAGATGAATTGCCATTTATCGATCGGATGGTGTTCACGTCGTCTAGCCTGCCGGCGTTGCGGCGTTTTGACCACCCGGAGTTTAAGCCTCCACCACTTATCCTTGGAAGAACGGACAACATTGAAGAACAAAAGAAAAGCAGGAGGGAGGCAAGATTCAAGCTAACAGCAGAACAGGTGCAGAAATTGAAGCAAAAGGCACATATTGGTGGTGATTCTGAGTCCATGCAGAGACCCGTCAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGTATGGCCCGTGGGCTTGACAAAAGTCAACCAACCTTAGCGAAGACAATGGTTAATGTTCGCAACAAGGTAAATCCTCCTCTACCGAAAAACTATTTTGGGAATGCTATAGCTTCCACAGTAACATCAACATGCTGCGTTGGAGATATCATATCAGAGCCGCTGGGTTATACTGCAAAAAAGATAAGAGAAGCAGTGGAACGGGTTTCAAATGACGAGTACATAAGATCACAACTGGAGCACATAGCGGAAGTACAGGACGGAATGGATTCGATCAGGACTCAATTCTTGGAAAAAGGAGAGTACAAAGCAAATGCATCCTTCTATGGGAACCCTAACATTGTGCTTGGAAGTTGGACGCATTTTCCGGTGTATGAAACAGATTTTGGTTGGGGAAAGCCTAATTATTTTGGTCCAACCTATGTGTCTCCTTTCGATATGGGAATTGTGGCTCCAAGCCCTGATGGTGATGATGGCTCCGTTCTTGTCTTACTGTGTTTTCAGATAGAACACATGGACAAATTCATCAAGCACTTTTGGGATATATAA 1383 0.4403 MVSIKASYVVTPKEETPKGLFCLSESDQIWRWSHTATIYVYNNNNNDVNMNVDELVQRMRDSLSHLLVHYYPLCGRLSWTEGGRLQMDCNTKGVILIQAESTKSIDEYGEFSPNDDAIKELIPNLDYSKPIEDIPLFLAQVTKFHGDGNAIAIATAISHTMSDGVSRTQFNNSWAKLARGGALGPDELPFIDRMVFTSSSLPALRRFDHPEFKPPPLILGRTDNIEEQKKSRREARFKLTAEQVQKLKQKAHIGGDSESMQRPVSRFEAIGAHIWRCACMARGLDKSQPTLAKTMVNVRNKVNPPLPKNYFGNAIASTVTSTCCVGDIISEPLGYTAKKIREAVERVSNDEYIRSQLEHIAEVQDGMDSIRTQFLEKGEYKANASFYGNPNIVLGSWTHFPVYETDFGWGKPNYFGPTYVSPFDMGIVAPSPDGDDGSVLVLLCFQIEHMDKFIKHFWDI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00010 460 Gene3D - 1 214 IPR023213 -
Stsc60504g00010 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
Stsc60504g00010 460 Gene3D - 221 460 IPR023213 -
Stsc60504g00010 460 Pfam Transferase family 1 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00010 Stsc-Chr60504 52226 54806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00010 2 460 Monolignol Biosynthesis Gene Families AT5G48930 33.115 3.69e-77 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00010 K13065 - gmx:100779814 453.751