Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00009 ATGGTAACAATCAAAGCATCTTATGTAGTCACTCCAAAAGAAGAAACTCCAAAGGGTCCTTTCTGCTTATCAGAGTGTGACCAATTCTGTCATCGGAATCATACACTTTCAGTTTACATTTACAACCCAAAACACAATAACAATAACAATATCAATTTCAATGAGCTTGTTCAAAGAATGAGAGAATCCCTTAGCCAGATTCTGGTTCACTACTATCCCTTATGTGGCCGCTTGAATTCTATACAAGGTGGTCGTTTAAAGCTTGATTGTAACGCAAAGGGAGCCATGTTGTTTGAAGCTGAATCCACTAAATCAATGGCTGAATTTGGAGACTTCTCACCAAATGATGGTGCCATCAAAGAACTCATACCGAAGCTTGATTACTCTCAACCCATTCAGGACCTTCCTCTGTTTCTCGCACAGGTCACAAAGTTCCAAGGCGGTGATGGCATTGCCATAGGAACTGCCTTGTATCACACAATAAGTGATGGACTTGCAAGCATTCAATTCATCAACTCATGGGCCAAACTCAATAGAGGAGACACATTGGACCCAAATGATTTGCCATTTCTTGACAGAACTGTGTTCACAGCCTCTCGGTTGCCGGCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCGCCACTCATCCTGGGAAGAACAGATACCAGTGAAGAACAAAAGAAGAAGACAAGGTTTGCATTGTTGAAGCTCACAGCTGAACAGGTGCAGAAATTGAAACAGGATGCAAATATTGGTTATTCTGAATCCCAGCAGGAGAGACCGTATAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGCATAGCCCGTGAGCTTGACAAAAATCAACCAACCATGGCAAGGACGGTCGTGGATGTTCGCAACAAGGCGAATCCTCCTCTACCAAAAAACTATTTTGAGAATGCTTTGGGTATTACCGTAACACCAGCGTGCCTGGTTGGAGACATGATATCCGAGCCGCTGAGCTACGCTGCGAAATGGATAAGAGAGGCAATGGAAAGAGTTGCAAATGACGAGTATATAAGATCACAAATTGAGACTATAGCTCGCGGAGAGTACAGAGCAGGTATGATCTTCGTTGGGAGCCCTAACATTGCATTTATAAGCTGGATGGGAATGACAGTATATGAAGCAGATTTTGGTTGGGGAAAGCCAGATTATTTTGGTCCTGGTGCTGTGTCTCCCGCTGATATTGGGATGATGGCTCTAACCCCACATGGGATGGCTCCATTCTCATCTTCATGCATTTTCAGATGGCTCGCATGGATAAGTTCATCATCAACCTCTTTTGGGATATTTTATGAGATCATGCTATGGAGGCAGCAGTGGAAAGTGTAG 1374 0.441 MVTIKASYVVTPKEETPKGPFCLSECDQFCHRNHTLSVYIYNPKHNNNNNINFNELVQRMRESLSQILVHYYPLCGRLNSIQGGRLKLDCNAKGAMLFEAESTKSMAEFGDFSPNDGAIKELIPKLDYSQPIQDLPLFLAQVTKFQGGDGIAIGTALYHTISDGLASIQFINSWAKLNRGDTLDPNDLPFLDRTVFTASRLPALRRFDHPEFKPPPLILGRTDTSEEQKKKTRFALLKLTAEQVQKLKQDANIGYSESQQERPYSRFEAIGAHIWRCACIARELDKNQPTMARTVVDVRNKANPPLPKNYFENALGITVTPACLVGDMISEPLSYAAKWIREAMERVANDEYIRSQIETIARGEYRAGMIFVGSPNIAFISWMGMTVYEADFGWGKPDYFGPGAVSPADIGMMALTPHGMAPFSSSCIFRWLAWISSSSTSFGIFYEIMLWRQQWKV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00009 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 403 - -
Stsc60504g00009 457 Gene3D - 220 445 IPR023213 -
Stsc60504g00009 457 Pfam Transferase family 1 415 - -
Stsc60504g00009 457 Gene3D - 1 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00009 Stsc-Chr60504 47523 50871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00009 2 405 Monolignol Biosynthesis Gene Families AT5G48930 34.804 1.80e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00009 K13065 - gmx:100779814 439.499