Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00007 ATGGCTGAATTTGGAGACTTCTCACCAAATGATGGTGCCATCAAAGAACTCATACCGAAGCTTGATTACTCTCAACCCATTGGGGACCTTCCTCTGTTTCTTGCACAAGTCACAAAGTTCCAAGGTGGTGATGGCATTGCCATAGGAACTGCCTTGTATCACACAATAAGTGATGGACTTGCAAGCATTCAATTCATCAACTCATGGGCCAAACTCAATAGAGGAGACACATTGGACCCAAATGATTTGCCATTTCTTGACAGAACTGTGTTCACAGCCGCTCGGTTGCCGGCGTTGCGGCGTTTCGACCACCCGGAGTTTAAGCCTCCGCCACTCATCCTGGGAAGAACAGATACCAGGGAAGAACAAAAGAAGAAGACAAGGTTCGCATTGTTGAAGCTCACAGCAGAACAGGTGGAGAAATTGAAGGAGAATGCAAATATTGGTTATTATGAATCCGAGGAGAGACCGTATAGCAGATTTGAAGCCATTGGAGCACATATATGGCGATGTGCTTGCATGGCCCGTGAGCTTCACAAAGATCAACCAACCGTGGCAAGGACGGTGGTCGATGTTCGCAACAAGGTAAATCCTCCTTTGCCGAAAAACTATTTTGGAAATGCTTTGAGTATCACCATAACACCAACATGCTTGGTTCAAGAGATGATATCAGAGCCGGTGAGTTATGGTGCAAAAAGGATAAGAGAAGCAGTGGAAAGGGTTGCAAATGACGAATACATAAGATCACAAATCGACGTTATAGCTCGAGGAGAGTATAGAGCAGGTACGATCTTTGTTGGGAGCCCTAACATGGCACTTATAAGCTGGATGGGAATGGCAATATATGAAGCAGATTTTGGTTGGGGAAAGCCAGATTATTTTGGTCCAGGTGCTGTGTCCCCCTTTGATATTGGGATGATGGGTCCAACCCCACATGGGGATGGCTCCATGCTCATCTTCATGCATTTTCAGATAGAGCAAATGGATAAGTTCATCAACCTCTTTTGGGATACTCAATGA 1020 0.4539 MAEFGDFSPNDGAIKELIPKLDYSQPIGDLPLFLAQVTKFQGGDGIAIGTALYHTISDGLASIQFINSWAKLNRGDTLDPNDLPFLDRTVFTAARLPALRRFDHPEFKPPPLILGRTDTREEQKKKTRFALLKLTAEQVEKLKENANIGYYESEERPYSRFEAIGAHIWRCACMARELHKDQPTVARTVVDVRNKVNPPLPKNYFGNALSITITPTCLVQEMISEPVSYGAKRIREAVERVANDEYIRSQIDVIARGEYRAGTIFVGSPNMALISWMGMAIYEADFGWGKPDYFGPGAVSPFDIGMMGPTPHGDGSMLIFMHFQIEQMDKFINLFWDTQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00007 339 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 322 - -
Stsc60504g00007 339 Gene3D - 115 335 IPR023213 -
Stsc60504g00007 339 Gene3D - 1 109 IPR023213 -
Stsc60504g00007 339 Pfam Transferase family 2 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00007 Stsc-Chr60504 37330 39630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00007 3 331 Monolignol Biosynthesis Gene Families AT5G48930 33.934 3.69e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00007 K13065 - gmx:100779814 366.311