Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00006 ATGGTAACAATCATAGAATCTTATGTAGTCACCCCTAAAGAAGAAACTCCAAAGGGTGATTTTTTCTTATCAGAGATTGACCAAATCTGTCGTTGGAGTCCTACACCTTCAATCTACATTTACAACAACAACAGCAATCTCAATGTGAATGAGCTTCTTCAAAGAATGAGAGACTCCCTTAGTGAGATTTTGGGAGCCATGTTGATTCAAGCTGAATCCACAAAATCAATGGATGAATATGGAGACTTCTCACCAAACGATGATAACATCAAAGAACTCATACCAAACCTTGATTACTCTCAACCCATTGAGGACCTTCCTCTGTTTCTCGCACAAGTCACAAAGTTCCATGGTGGTGGCAATGCCGTTGCCATTGGAACTGCCATATCTCATCCATTCAGTGATGGGCTTTCAGCTTTTCACTTCATCAACTCATGGGCCAAACTGTTGGGAAAATTCAGGTTCAAGCCAGAATCACAGCGGAAGGATCAAAATATTTTATCATAA 507 0.4024 MVTIIESYVVTPKEETPKGDFFLSEIDQICRWSPTPSIYIYNNNSNLNVNELLQRMRDSLSEILGAMLIQAESTKSMDEYGDFSPNDDNIKELIPNLDYSQPIEDLPLFLAQVTKFHGGGNAVAIGTAISHPFSDGLSAFHFINSWAKLLGKFRFKPESQRKDQNILS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00006 168 Pfam Transferase family 65 152 - -
Stsc60504g00006 168 Gene3D - 1 66 IPR023213 -
Stsc60504g00006 168 Gene3D - 67 164 IPR023213 -
Stsc60504g00006 168 PANTHER F21J9.9 3 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00006 Stsc-Chr60504 34638 35220 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00006 2 149 Monolignol Biosynthesis Gene Families AT5G48930 30.058 1.22e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00006 K13065 - gmx:100787038 135.576