Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00005 ATGAATTGGGGAGCCCACCAACACAAACTAACTCGGGGAGACTCATTGCACCCGGATGAACTGCCATTTTTTGATCGGACGGTGTTCACAACCTCTCGACTGCCGCCGTCGCGACGTTTTGACCACCTGGAGTTTAAGCCTCCACCGCTCATCCTAGGAAGAACATACAACACTGAAGAACGGAAGAAGAAGACAAAGTTTGCATTGTTGAAGCCCACAACAGAACAAGTACAGAAATTGAAGCAGAATGCCAATATTGATCATTCTTGTGAATCCGAGGAGAAACCCTACAGCAGATTTGAAGCCATTGGAGCATATATATGGCAATGTGCTTGTAAGGCCCATGGGCTTGACAAAGACCAACCGACCAGAGCGAGGATGGTGGTTAATGTTCGTAGCAAGTTTGGTAATGCTTTGGCAAGGACAGTGACAACAACATGTTCCGCTGGAGAAATCACATCAAAGCCGCTAAGTTATGGTGCACAAAGGATAAGAGAAGCTGTGAAAATTGGTTCGAATGAAGAGTACATAAGATCGCAAATGGAGTTTATAGCGCAACAAGAGACAATTAGATGTGATTCGGACTAA 588 0.4524 MNWGAHQHKLTRGDSLHPDELPFFDRTVFTTSRLPPSRRFDHLEFKPPPLILGRTYNTEERKKKTKFALLKPTTEQVQKLKQNANIDHSCESEEKPYSRFEAIGAYIWQCACKAHGLDKDQPTRARMVVNVRSKFGNALARTVTTTCSAGEITSKPLSYGAQRIREAVKIGSNEEYIRSQMEFIAQQETIRCDSD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00005 195 Gene3D - 53 193 IPR023213 -
Stsc60504g00005 195 Pfam Transferase family 10 187 - -
Stsc60504g00005 195 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00005 Stsc-Chr60504 29243 30154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00005 22 192 Monolignol Biosynthesis Gene Families AT5G48930 28.333 4.10e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00005 K13065 - gmx:100779814 173.711