Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60504g00003 ATGGTGGTAACAATCAAAGCATCCTATGTGGTCACCCCTAAAGAAGAAACTCCAAAGGGTCAATTTTTCTGCTTATCAGAGGTTGACCAAATCTGTCGTCCGGATCATACACCCTCAATCTACATTTACAACAACAACAATGTAAATGTGAATGTCCTTGTTCAAAGAATGAGAGACTCCCTTAGCCAGATTCTGGTTCACTACTATCCCTTATGTGGCCGCTTGAATTTGATAGAAGGTGGCCGTTTGAAACTTGATTGTAATGCAAAGGGAGCCATGTTGTTTGAAGCAGAATCCACTAAAACAATGGATGAATATGGAGACTTCTCACCAAATGATGATGCCATCAAAGAACTCATACCAAACCTTGATTACTCTCAACCCATTGAGGATCTTCCTTTGTTTCTTGCACAAGTCACAAAGTTCCATGGTGGCAATGCCGTTGCCATTGGAATTGCCATGTCTCATCCAATGTGTGATGGGATTTCAGCCCTTCAGTTCGTGTACTCATGGGCCAAACTCACCCGGGGAGACTCATTGCACCCAACTGAATTGCCATTTCTTGATCGAACGGTGTTCACAGCCTCTCGGCTGCCAGCATCGCGGCGTTTCGATCATCCGGAGTTTAAGATTCCACCGCTCATCCTGGGAAGAACAGACGATGTTGAAGAAAGAAAGAAGAAGACGAAGTTTGCATTGTTGAAGCTCACAGCAGAACAGATGCAGAAATTGAAGCAGAAAGCCAATATTGATCATTCTTGTGAATCTGGGCAGAGACCCTACAGCAGATTTGAAGCCATTGGAGCATATATATGGCGATGTGCTTGTAAGGCCCATGGGCTTGACAAAGCCCAACCAACTAGAGCGAGGACGATGGTTAATATTCGTAACAAGGTGAATCCTCCTCTGCCGAAGAACTATTTTGGGAATGGTTTGGCAAGGACAGTGACAGAAATATGTTACGCCGGAGAAATCACATCGAAGCTACTAAGCTACGGTGCTCAAAGGATAAGAGAAGCTGTGGAAATGAGTGGGAATGAAGAGTACATAAGATCGCAACTGGAGTTTCTAGCGCAGCAAGAGACAATGGATGTGATTAGGAATAAGTACATGGTAAAAGGAGAGCATGGAAAACCTGATGTTTCGTTCTATGGAAACCCCAACATTATGCTTGGAAGCTGGTTGAGTATGCCAATGTATGAAGTAGATTTTGGTTTGGGAAAACCATATTATTTTGGTCCAGGTGCTGTTTATCCCTTAGATTATGGGATTATGGCTCCGAGCCGAGATGGGGATGGATCCATTGTTATCTTCATGAATTTTCAAATGGCGGACATGGAGAATTTCATCAACATCTTTTGGGATAATTTATGA 1374 0.433 MVVTIKASYVVTPKEETPKGQFFCLSEVDQICRPDHTPSIYIYNNNNVNVNVLVQRMRDSLSQILVHYYPLCGRLNLIEGGRLKLDCNAKGAMLFEAESTKTMDEYGDFSPNDDAIKELIPNLDYSQPIEDLPLFLAQVTKFHGGNAVAIGIAMSHPMCDGISALQFVYSWAKLTRGDSLHPTELPFLDRTVFTASRLPASRRFDHPEFKIPPLILGRTDDVEERKKKTKFALLKLTAEQMQKLKQKANIDHSCESGQRPYSRFEAIGAYIWRCACKAHGLDKAQPTRARTMVNIRNKVNPPLPKNYFGNGLARTVTEICYAGEITSKLLSYGAQRIREAVEMSGNEEYIRSQLEFLAQQETMDVIRNKYMVKGEHGKPDVSFYGNPNIMLGSWLSMPMYEVDFGLGKPYYFGPGAVYPLDYGIMAPSRDGDGSIVIFMNFQMADMENFINIFWDNL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60504g00003 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 440 - -
Stsc60504g00003 457 Gene3D - 1 211 IPR023213 -
Stsc60504g00003 457 Gene3D - 218 455 IPR023213 -
Stsc60504g00003 457 Pfam Transferase family 2 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60504g00003 Stsc-Chr60504 18790 20695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60504g00003 1 449 Monolignol Biosynthesis Gene Families AT5G48930 34.000 1.39e-80 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60504g00003 K13065 - gmx:100778626 468.388