Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60503g00014 ATGAAGAAAGGGTGCTTAGGCCCCAATCTGAAGCTTACTCTTCCTCTTCCTCCAACTCATCATCCTTCTTTTCCAACCTTCCTGAATGAAGGCGGCGGGTTTATCGATGAGAATCTGCTTGTCAATGCCGACGGAGTTTTGATCGTTTCTCAGACTGAACTGGGAACTCCACCCCCAGTAAAGGCACTAGACAACCAACTAAGTTTGGCAGACATTGACACAATCAAAGTGATTGGAAAGGGAAATGGAGGGATAGTGCAGTTGGTGCAACACAAATGGACTAATCAGTTTTTCGCATTAAAGGAAATCCGAATGACGATCGAGGAGCCAATGCACAAGCAGATAGCAAGAGAGCTAAAAATTAATCAGTCAGCACAATGTCCATATGTTGTTGTTTACTACCAATCATTCTACAATAATGGGGTCATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGAAGATTTTCTTAGCATAGTCAAAACAATTCCAGAGCCATATCTTGCTGCCATCTGCAAGCAGGTGCTCAAGGGTCTAATTTATCTTCACCATGAGAAACATATTATCCATAGGGACTTAAAGCCTTCCAACTTGTTGATAAATCATAGAGGAGAAGTAAAGATTACTGATTTTGGTGTGAGCGCAATCATGGAAACTACGTCCGGTCTAGCTAATACTTTTATCGGCACATACATCTACATGTCTCCAGAGAGAATTACTGGAAACCCTGGTGGCTACAACTACAGAAGTGATATATGGAGTTTGGGACTGATATTGCTCAAGTGTGCTACAGGGAAGTTTCCGTATACACCGCCTGATAAAAAAGAAGGATGGGAAAATATCTACCAGCTTATTGAAGTCATTGTTGAAAAGCCTCCGCCGAGTGCTCCATCTGATCAGTTTTCTCTCGAGTTTTGTTCATTCATCTCTGCATGTTTACAGAAAAATCCAAAGGATAGAAAGTCAGCTCAAGACCTTGTGAGACATCCATTTATCAGCATGTATGACGACTTGGATGTGGACCTTTCAGCATACTTCTCCAATGGAGGATCTACACTCTCAACCATATAA 1077 0.4178 MKKGCLGPNLKLTLPLPPTHHPSFPTFLNEGGGFIDENLLVNADGVLIVSQTELGTPPPVKALDNQLSLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKEIRMTIEEPMHKQIARELKINQSAQCPYVVVYYQSFYNNGVISIILEYMDGGSLEDFLSIVKTIPEPYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMETTSGLANTFIGTYIYMSPERITGNPGGYNYRSDIWSLGLILLKCATGKFPYTPPDKKEGWENIYQLIEVIVEKPPPSAPSDQFSLEFCSFISACLQKNPKDRKSAQDLVRHPFISMYDDLDVDLSAYFSNGGSTLSTI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60503g00014 358 FunFam Mitogen-activated protein kinase kinase 6 153 353 - -
Stsc60503g00014 358 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Stsc60503g00014 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 21 337 - -
Stsc60503g00014 358 Gene3D Phosphorylase Kinase; domain 1 57 151 - -
Stsc60503g00014 358 FunFam Mitogen-activated protein kinase kinase 1 56 151 - -
Stsc60503g00014 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Stsc60503g00014 358 SUPERFAMILY Protein kinase-like (PK-like) 69 341 IPR011009 -
Stsc60503g00014 358 SMART serkin_6 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60503g00014 358 CDD PKc_MAPKK_plant_like 70 338 - -
Stsc60503g00014 358 Gene3D Transferase(Phosphotransferase) domain 1 152 354 - -
Stsc60503g00014 358 ProSiteProfiles Protein kinase domain profile. 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60503g00014 358 Pfam Protein kinase domain 74 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60503g00014 Stsc-Chr60503 68724 72364 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60503g00014 30 355 MAP Kinase Kinase Gene Family AT4G26070 63.497 2.07e-158 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Stsc60503g00014 Pkinase 6.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60503g00014 K20603 - qsa:O6P43_002713 536.569