Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60503g00011 ATGGAGGAAATTACTTCGACGGTTGCGGTGCCATTCAGGCTTGGGAATTTGATTCAGAAAGAGTCAACGGTGGCAACCCGCATGGAGATAACTGGTCTGAAGTTCATGGCAAACACAGCAGCTTTGATATTAAATCCCACAATTGAAGGTCATCATCAATCTTACTCTGTTGGAACTGAAGACATCTGCAAAGATATAAGTCTAAAACACCAAACTAAATCATCTGCAGAGGTAAAGGCGAAACAGGGTCGACCCAACTCAGCTCCCATTACATCAGAAATGCTTACTGAATTTAACATGAAAGAAGAATTCATGTCAGCTAATGGTTTTCACTCTGTACATAATCAAAGTTCTGAATCCGTTGCCAGTGACAAAAGTTGTCCTGGGAATGAAGCTGCTACTTTGACAGATAATTGTTCTGATTCTGATAATGATTTGCCAATTGCCATCAAGTTTAATACTAATATCCACGGAAAGTCCAGTTCGATCGAGCTGAGTGCAGAGCTGGGGCCTGTGCAGAACATGCTTTCTGCTGCTATGGAACTTGAAACTGAAGGAAGCGGATCGGACGGATTTGATAAAAAACCATCTGTCACTCTTCATGATGTGTCAGACAAGCAAACAAGCATAGCAGATTTCCAGAACGCATCAGAACCGAATGGAGGTCCTCTTTGGGGCTTCTCGTCAGTGTGCGGAAGGAGACAAGAGATGGAAGATGCTGTTGCTTGTCAGCCTCAACTTCTTCAAGTTCCTTCACAGATGCTAGCAGATGACCATGTTAATGAAAATGGAAACTCGTCAGCCCACTTTTTCGGTGTCTATGATGGACATGGCGGTTGTCAGGTGGCCAATTACTGCCGGGAACATCTTCACTCGGTGTTGACCGAGGAGATAGAAGCTGCAAAATCTAGTTTGTCTGACAACAATGGGAGGGAGAACTGGCAAGACTATTGGAAGAAAGCATTCTCTAATTGTTTTCATAAAGTAGATGATGCAGTAGGACGAGTCGGGGCACCAGATGATGAAAGCCATTGTGATGGATCCGAGTGTAGTATTGAACCTCTTACTCCTGAGACTGCAGGCTCTACTGCAGTGGTTGCTATTTTAACTCAAACCCACATTATAGTTGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGCGGAAAAGAAGCCATGCCATTATCTACTGATCACAAACCAAATAGAGAGGATGAATGGGAAAGGATAGAAGCTGCTGGAGGAAGGGTCATACAGTGGAATGGTTTCCGAGTTCTTGGAGTTTTGGCAGTTTCAAGATCCATAGGTGATAGGTACTTGAAACCATGGATAATTCCAGAACCAGAAGTCATGTTTGTTCAAAGAGAGAGAACCGACGAGTGCCTTATTCTTGCCAGTGATGGTCTCTGGGACATCATCACAAACGAAGAAGCTTGTGACATTGCGCGAAAACGAATCCTTCTTTGGCACAAGAAGAATGGCAGCAGCAGCAGCAACAACAATATCAGCATATCAACAGGACATGGCCATGGCATTGATCCTGCAGCTCAGTATGCTGCAGAATGTCTATCTAAACTTGCCATCCAAAGGGGAAGCAAAGACAATGTCTCTGTCATTGTTATAGACTTAAAGGCTCAAAGAAAATTGAAGAGGAAAGCATAG 1662 0.4362 MEEITSTVAVPFRLGNLIQKESTVATRMEITGLKFMANTAALILNPTIEGHHQSYSVGTEDICKDISLKHQTKSSAEVKAKQGRPNSAPITSEMLTEFNMKEEFMSANGFHSVHNQSSESVASDKSCPGNEAATLTDNCSDSDNDLPIAIKFNTNIHGKSSSIELSAELGPVQNMLSAAMELETEGSGSDGFDKKPSVTLHDVSDKQTSIADFQNASEPNGGPLWGFSSVCGRRQEMEDAVACQPQLLQVPSQMLADDHVNENGNSSAHFFGVYDGHGGCQVANYCREHLHSVLTEEIEAAKSSLSDNNGRENWQDYWKKAFSNCFHKVDDAVGRVGAPDDESHCDGSECSIEPLTPETAGSTAVVAILTQTHIIVANCGDSRAVLCRGKEAMPLSTDHKPNREDEWERIEAAGGRVIQWNGFRVLGVLAVSRSIGDRYLKPWIIPEPEVMFVQRERTDECLILASDGLWDIITNEEACDIARKRILLWHKKNGSSSSNNNISISTGHGHGIDPAAQYAAECLSKLAIQRGSKDNVSVIVIDLKAQRKLKRKA 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60503g00011 553 PANTHER PROTEIN PHOSPHATASE 174 543 IPR015655 GO:0004722|GO:0006470
Stsc60503g00011 553 SUPERFAMILY PP2C-like 222 544 IPR036457 -
Stsc60503g00011 553 CDD PP2Cc 226 543 IPR001932 -
Stsc60503g00011 553 SMART PP2C_4 214 541 IPR001932 -
Stsc60503g00011 553 Pfam Protein phosphatase 2C 226 536 IPR001932 -
Stsc60503g00011 553 ProSiteProfiles PPM-type phosphatase domain profile. 224 543 IPR001932 -
Stsc60503g00011 553 MobiDBLite consensus disorder prediction 115 140 - -
Stsc60503g00011 553 ProSitePatterns PPM-type phosphatase domain signature. 270 278 IPR000222 GO:0043169
Stsc60503g00011 553 Gene3D - 214 553 IPR036457 -
Stsc60503g00011 553 FunFam Protein phosphatase 2C 16 213 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60503g00011 Stsc-Chr60503 64979 68136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60503g00011 223 552 PP2C-type Phosphatase Gene Family AT4G26080 59.394 9.17e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60503g00011 K14497 - gmx:100789207 596.66