Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60503g00010 ATGGAGGAAATTACTTCGACGGTTGCGGTGCCATTCAGGCTTGGGAATTTGATTCAGAAAGAGTCAACGGTGGCAACCCGCATGGAGATAACTGGTCTGAAGTTCATGGCAAACACAGCAGCTTTGATATTAAATCCCACAATTGAAGGTCATCATCAATCTTACTCTGTTGGAACTGAAGACATCTGCAAAGATATAAGTCTAAAACACCAAACTAAATCATCTGCAGAGGTAAAGGCGAAACAGGGTCGACCCAACTCAGCTCCCATTACATCAGAAATGCTTACTGAATTTAACATGAAAGAAGAATTCATGTCAGCTAATGGTTTTCACTCTGTACATAATCAAAGTTCTGAATCCGTTGCCAGTGACAAAAGTTGTCCTGGGAATGAAGCTGCTACTTTGACAGATAATTGTTCTGATTCTGATAATGATTTGCCAATTGCCATCAAGTTTAATACTAATATCCACGGAAAGTCCAGTTCGATCGAGCTGAGTGCAGAGCTGGGGCCTGTGCAGAACATGCTTTCTGCTGCTATGGAACTTGAAACTGAAGGAAGCGGATCGGACGGATTTGATAAAAAACCATCTGTCACTCTTCATGATGTGTCAGACAAGCAAACAAGCATAGCAGATTTCCAGAACGCATCAGAACCGAATGGAGGTCCTCTTTGGGGCTTCTCGTCAGTGTGCGGAAGGAGACAAGAGATGGAAGATGCTGTTGCTTGTCAGCCTCAACTTCTTCAAGTTCCTTCACAGATGCTAGCAGATGACCATGTTAATGAAAATGGAAACTCGTCAGCCCACTTTTTCGGTGTCTATGATGGACATGGCGGTTGTCAGGTGGCCAATTACTGCCGGGAACATCTTCACTCGGTGTTGACCGAGGAGATAGAAGCTGCAAAATCTAGTTTGTCTGACAACAATGGGAGGGAGAACTGGCAAGACTATTGGAAGAAAGCATTCTCTAATTGTTTTCATAAAGTAGATGATGCAGTAGGACGAGTCGGGGCACCAGATGATGAAAGCCATTGTGATGGATCCGAGTGTAGTATTGAACCTCTTACTCCTGAGACTGCAGGCTCTACTGCAGTGGTTGCTATTTTAACTCAAACCCACATTATAGTTGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGCGGAAAAGAAGCCATGCCATTATCTACTGATCACAAACCAAATAGAGAGGATGAATGGGAAAGGATAGAAGCTGCTGGAGGAAGGGTCATACAGTGGAATGGTTTCCGAGTTCTTGGAGTTTTGGCAGTTTCAAGATCCATAGCAATACCACAGCAAACCTTTTCTTCACAAATCTGCATACAACGCAAGATTCTGTAA 1362 0.4347 MEEITSTVAVPFRLGNLIQKESTVATRMEITGLKFMANTAALILNPTIEGHHQSYSVGTEDICKDISLKHQTKSSAEVKAKQGRPNSAPITSEMLTEFNMKEEFMSANGFHSVHNQSSESVASDKSCPGNEAATLTDNCSDSDNDLPIAIKFNTNIHGKSSSIELSAELGPVQNMLSAAMELETEGSGSDGFDKKPSVTLHDVSDKQTSIADFQNASEPNGGPLWGFSSVCGRRQEMEDAVACQPQLLQVPSQMLADDHVNENGNSSAHFFGVYDGHGGCQVANYCREHLHSVLTEEIEAAKSSLSDNNGRENWQDYWKKAFSNCFHKVDDAVGRVGAPDDESHCDGSECSIEPLTPETAGSTAVVAILTQTHIIVANCGDSRAVLCRGKEAMPLSTDHKPNREDEWERIEAAGGRVIQWNGFRVLGVLAVSRSIAIPQQTFSSQICIQRKIL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60503g00010 453 CDD PP2Cc 226 435 IPR001932 -
Stsc60503g00010 453 FunFam Protein phosphatase 2C 50 222 441 - -
Stsc60503g00010 453 SUPERFAMILY PP2C-like 222 438 IPR036457 -
Stsc60503g00010 453 SMART PP2C_4 214 453 IPR001932 -
Stsc60503g00010 453 Gene3D - 214 438 IPR036457 -
Stsc60503g00010 453 MobiDBLite consensus disorder prediction 115 140 - -
Stsc60503g00010 453 PANTHER PROTEIN PHOSPHATASE 169 435 IPR015655 GO:0004722|GO:0006470
Stsc60503g00010 453 ProSiteProfiles PPM-type phosphatase domain profile. 224 453 IPR001932 -
Stsc60503g00010 453 ProSitePatterns PPM-type phosphatase domain signature. 270 278 IPR000222 GO:0043169
Stsc60503g00010 453 Pfam Protein phosphatase 2C 226 435 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60503g00010 Stsc-Chr60503 64979 68136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60503g00010 185 436 PP2C-type Phosphatase Gene Family AT5G57050 51.181 2.15e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60503g00010 K14497 - gmx:100802159 430.639