Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60503g00008 ATGGAATGTATTTTGATTATATGCAGGCGTTTGGTACTAGAACAAAAGTTAGCATCTTCTCATGTATCAGAAGAGGAACAAATGAATCTATTAAAAGATTTAGAGCGCAAGGAGACTGAGTATATAAGGTTAAAAAGAAACAAAATATGTGTTGATGATTTTGACCTTCTAACAATTATTGGAAGGGGAGCCTTTGGAGAGGTGAGAGTTTGTCGGGAGAAGAAATCGGGTAACATATACGCCATGAAAAAGTTGAAGAAATCTGAAATGCTCAGAAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGCACTTGCAGAAGTTGCAAGTGATTGCATTGTGAAGCTATATTACTCTTTTCAGGACGATGAATACTTATATCTAATAATGGAGTATTTACCTGGTGGTGATATAATGACTCTGCTTATGAGAGAGGAAATTTTGACCGAAACCATGGCTCGATTTTACATTGCCCAAACTGTTTTGGCCATAGAATCTATTCATAAACACAACTACATTCACCGAGACATAAAACCAGACAACCTTTTATTGGACAAAAGTGGTCACATGAAGCTTTCTGATTTTGGTCTTTGCAAGCCACTTGACTGCTCTAATTTGTCGTCTATAAATGAAAATGAAGTGCTGGATGATGAGAACTTGAATGATACGATGGACATTGATGGATCCAACCCAGATCAAAGAAATGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCACCATTGGCAAATGAATAGGAGGACTTTGGCATTCTCCACGGTCGGTACTCCTGATTATATTGCTCCTGAAGTGCTACTAAAGAAAGGCTATGGTGCAGAGTGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAGATGCTTGTTGGTTATCCCCCATTTTACTCTGATAATCCTGTAACAACATGTAGAAAGATTGTACATTGGAAAAATCACTTAAAATTTCCAGATGAGATAAGGATGAGCCCAGAAGCAAGGCATCTAATATGTAGGTTACTTTGTGATGCTCAACATAGGCTTGGTATTAATGGAGCTGATGAAATTAAAGCTCATCCTTGGTTCAAACATGTTGAATGGGACAGGCTTTATGAAATGGATGCAGCATTTAAACCACAAGTCAATGGAGAGCTTGACACTCAGAATTTTATGGAATTTAATGAGGTTGAAGTAGATCGACCAAAACCAACTAGAACTGGATCCGGGCCAATCAGAAAAAAGTTGTTGACTCCTGAGGATCTCAGTTTTGTTGGCTATACATACAAGAATTTTGCAGCTGTCAAGGGAGCACGCCATTCTATTGATAGGTTGTCCTTGTCAACCCCACAGCGCACATCATCTGTGGACTCTACACAGAGTGATACTGCAATTGACTATTCCACATGA 1404 0.3932 MECILIICRRLVLEQKLASSHVSEEEQMNLLKDLERKETEYIRLKRNKICVDDFDLLTIIGRGAFGEVRVCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNALAEVASDCIVKLYYSFQDDEYLYLIMEYLPGGDIMTLLMREEILTETMARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKSGHMKLSDFGLCKPLDCSNLSSINENEVLDDENLNDTMDIDGSNPDQRNGRRWKSPLEQLHHWQMNRRTLAFSTVGTPDYIAPEVLLKKGYGAECDWWSLGAIMYEMLVGYPPFYSDNPVTTCRKIVHWKNHLKFPDEIRMSPEARHLICRLLCDAQHRLGINGADEIKAHPWFKHVEWDRLYEMDAAFKPQVNGELDTQNFMEFNEVEVDRPKPTRTGSGPIRKKLLTPEDLSFVGYTYKNFAAVKGARHSIDRLSLSTPQRTSSVDSTQSDTAIDYST 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60503g00008 467 SMART pkinase_C_6 362 429 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc60503g00008 467 MobiDBLite consensus disorder prediction 444 467 - -
Stsc60503g00008 467 SUPERFAMILY Protein kinase-like (PK-like) 37 404 IPR011009 -
Stsc60503g00008 467 Gene3D Phosphorylase Kinase; domain 1 45 139 - -
Stsc60503g00008 467 FunFam Non-specific serine/threonine protein kinase 15 137 - -
Stsc60503g00008 467 ProSiteProfiles AGC-kinase C-terminal domain profile. 362 437 IPR000961 GO:0004674|GO:0005524|GO:0006468
Stsc60503g00008 467 FunFam Non-specific serine/threonine protein kinase 138 205 - -
Stsc60503g00008 467 Gene3D Transferase(Phosphotransferase) domain 1 140 378 - -
Stsc60503g00008 467 SMART serkin_6 54 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60503g00008 467 CDD MobB_NDR_LATS-like 9 49 - -
Stsc60503g00008 467 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 409 - -
Stsc60503g00008 467 ProSiteProfiles Protein kinase domain profile. 54 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60503g00008 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Stsc60503g00008 467 CDD STKc_NDR_like 52 428 - -
Stsc60503g00008 467 Pfam Protein kinase domain 56 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60503g00008 467 Pfam Protein kinase domain 254 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60503g00008 467 Coils Coil 27 47 - -
Stsc60503g00008 467 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
Stsc60503g00008 467 FunFam Non-specific serine/threonine protein kinase 380 391 - -
Stsc60503g00008 467 FunFam Non-specific serine/threonine protein kinase 260 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60503g00008 Stsc-Chr60503 40277 46680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60503g00008 9 466 AGC Kinase Gene Family AT2G19400 76.356 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Stsc60503g00008 Pkinase 4.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60503g00008 K08790 - csv:101208238 770