Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60502g00010 ATGGGAGACGTGGTGAAGGACCTCACGGCGGGGACGGTGGGAGGGGCGGCGCAGCTGATATGCGGCCACCCATTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCAGCACCAGTCCCTGGTCAGGCTCCAAAGTATTCAGGTGCAATTGATGCTGTGAAGAAGACATTAGCAGCTGAAGGTCCTAGAGGCTTGTACAAAGGCATGGGGGCCCCACTTGCAACGGTTGCAGCCTTCAATGCTGTCCTTTTTACAGTTAGGGGACAGATGGAATCATTGGTCAGGACTCAACCTGGTGTCCCTCTCACAGTTAGTCAGCAATTTGTCTGCGGAGCTGGCGCCGGCGTCGCCGTTTCCTTCCTTGCTTGCCCCACTGAACTTGTCAAATGCAGGTTACAAGCACAAAGTGCACTTGCTGGCACCGGAACAGGAACAGGAACAGCAGCAGCAGTGGCTGCTGTGAAGTATGGAGGACCAATGGATGTGGCTAGGCAAGTTCTAAGATCAGAAGGCGGCATGAGAGGCCTTTTCAAGGGCTTGCTTCCGACCATGGGCCGCGAGATTCCCGGAAACGCCATAATGTTTGGTGTCTATGAAGCCATCAAGCAGATGCTTGCAGGGGGCCCTGACACTTCAGGCCTAGGCAGAGGCTCTCTCATCCTCGCCGGCGGCTTGGCCGGCGCTTCCTTTTGGTTCATCGTTTACCCGACCGATGTTGTTAAGAGTGTCATCCAAGTAGATGATTACAAGAACCCAAAGTTCTCTGGCTCTCTAGATGCTTTTAGAAAGATTAAAGCCTCTGAGGGTTTTAAAGGCCTTTATAAGGGTTTCGGTCCGGCGATGGCGCGAAGCGTTCCGGCGAATGCCGCGTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTGGGCTGA 912 0.5417 MGDVVKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPAPVPGQAPKYSGAIDAVKKTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMESLVRTQPGVPLTVSQQFVCGAGAGVAVSFLACPTELVKCRLQAQSALAGTGTGTGTAAAVAAVKYGGPMDVARQVLRSEGGMRGLFKGLLPTMGREIPGNAIMFGVYEAIKQMLAGGPDTSGLGRGSLILAGGLAGASFWFIVYPTDVVKSVIQVDDYKNPKFSGSLDAFRKIKASEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60502g00010 303 Pfam Mitochondrial carrier protein 220 302 IPR018108 -
Stsc60502g00010 303 Pfam Mitochondrial carrier protein 102 206 IPR018108 -
Stsc60502g00010 303 Pfam Mitochondrial carrier protein 4 94 IPR018108 -
Stsc60502g00010 303 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 302 - -
Stsc60502g00010 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 301 IPR018108 -
Stsc60502g00010 303 Gene3D Mitochondrial carrier domain 2 302 IPR023395 -
Stsc60502g00010 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Stsc60502g00010 303 SUPERFAMILY Mitochondrial carrier 3 296 IPR023395 -
Stsc60502g00010 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 204 IPR018108 -
Stsc60502g00010 303 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60502g00010 Stsc-Chr60502 84196 85731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60502g00010 22 302 Antiporters AT1G79900 32.517 6.33e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60502g00010 K15109 - gmx:100791908 508.064