Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60500g00015 ATGAATGGGGTTCAGAACAGAAGAGTTCACAATGTTGAGAAACCTTTCCCTGGCTGCCTGGGAAGAATGGTTAACCTCTTTGATTTGACTGCTGGGGTTTCTGGAAACAAGTTACTCACCGATAAGCCACATCGTGATGCTTCTTCACTTTCGAGAAGTCAATCAGATGTGGCTAGGATCACCAGTCCTTCATTTGGTGATCAAATAGAGGATAAGCTGATGGTTTCAGACTCAATGAGGGGATCTTCTCAGAACAGAATCAATGGAACACCTATCAAGATGCTCATAGACCAAGAGATGTCCAAAGAAATTGTTTCCAAGCATAATCCACCTAATGTGGTTGCCAAATTGATGGGGCTTGAAGCCCTCCCACGGGGGGAGCCTAATTTGATCATGGAGAGAAGCTACAGAGGAGATTATTCTCAACATACGTGTGGTCATTCAGGGACACCATTCCGACACTGGCAGCTGGAAGATAGGTTTATGGACAAAGAAATGCTTCATGAAGGTCATCCGAGCACAGAACAGATTGCTTACAGAGATATTTATGAAATATGGCTTCAATCACAGAGAATGAACGATGTAAGAGACACGAAGCCAGATGAAGAAAAGTGGACTGAAGATGTTAGTGCGAAAAAAATGGCGTTCATTCGTCAGAAATTTATAGAAGCAAAACGTCTCTCTACGGATGAGAGACTGCGCCAGTCCAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCCAATAATGACCTATTAATCCGGTTATTGGATTCTCAGAATCTTTATGAGCTTCAGTCTACTCCAATTGCTGAGACAAAGCGTATTACTGTTCTTAAACCGTCGAAGATGGTTGACCGTGAAAAACCCTGTGGGAAGGGAAAGAAGAATGATAAATGTGTTAAGAAGCCAGCAAATATTGGTCAAGCAGCTGCTTGGGAGAAAACTAGTCCTGTGTATTCTCCAGCCAGTCAGAAGGTTGATGATTACCCAGTTCAACCTACTCGAATAGTGGTATTGAAACCAAGCTCTGGGAAGTCTCATGAGATTAAGGCCGTGCTTTCTCCTACAACTTCATCCCCTCGGAATCTGCACGGTGGAAGTTTATATCATGGTCTTGAAGATTGTGATGCACTAGAGCCAACAACAAATACTAGTGAAATCACACAGCAAATGCCTGAAAGCCTGAGGAGCCACCAAAGAGACGAAACATTCCATTCTTCAGTATTTTCCAATGGATATATCGGAGATGAAAGTTCATTTAACAAATCAGATAACGAGTATGCTGCAGGAAATTTCAGTGATTTGGAACTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGCCCTTTTTCTTCATCATCCTTCAGTCGTGCATCCTGTTCTCCTGAGTCATCTGTTTGCCGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCAACTAAAGGTACACAAGAGCATAGGCATCTTCGGAGAAGTTCTACGTTGGGTGAGATGCTTGCTCTTTCAGATATGAAGAAAGTTATAATATCTGAGGTTGAGGATATTAATAAAGACCAAAAACCTAGCAACTCTGTTTCTTGCAGTCGTAATTTCAATGAAGAAATATGCATGGTTGGGTCTCCTAAAAATCTTCCCAGGTCAAAATCTGTCCCTGTATCTTCCACTGTCTATGAAACTGGGGCGAGTGTCGAGGTTTGTAATCATGATACTAGCAAAGCAGATGTCTCCTTGGAGCTGACAAAGTCAAAGAACGGATCTCAATCACCTCTCACTGATACGTCAGTATCTCCAGTAAATTCACGTGGAGTTAGGGATGGTGAGTCTCAAAGCTTCAACAGTGGTGCCTTTGCAGAGTGTTCTCTTCCGGCTGTATATGAATCATCTGGAAAATCACATTCAGACTCTAATGGACAAGGCGTAGTATCTCTAGAGCCTGCAGTGCCTGGGACATCAACAGAAAACCATGATCAGCCAAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGAGAATGCAGCTCATGAGTCCTTAGACTGTACGAAGGGTGGTCAGCTGGGATCACGGCTGCTTCTGAAGTCTAATTTAATTGATAAATCACCACCGATAGAATCAATAGCTCGGACCCTGTCATGGGATGATTCATGTGCAGAGGTAGCAAGTCCCTATCCATTAAAACCATCATTGGTTTCCCTAGACACCAAGGTGGAGGAACAAGATTGGTTTGTCCTCGTTGATAAACTACTATCGGCTGCTGGACTTGATGATCAAGTGCGGTCCGACTCATTTTACCCAAGATGGCATTCCCTTGACAGTGCTTTGGATCCATCATTGAGGGATAACTACGCCAATCCAGATGACAAGGAGTCTCAGCCTCTCCACGAAGCCCGGCGAAGGCAGAGGAGATCCAACCAGAAGCTAGTATTTGATTGTGTCAATGTAGCCCTAATGGAGATTAGCGGTTATGGATCAGAGAAGTACTTAAGGTTATGGGGCGGGAGCAGTCATTGCATGTTCCCTGTCCCAGGGGGTGCAGCTCCTCCATTGGTGGACCTCATTGTGGCCCAGATGAAGGATTTAATATCTGGTGGGATGAGGTCTCTTTGGGGTGACTGTGGGGACAGTAACAGCCTGGTTGTGGAGAGTATTGTCAGAAAAGAGGTTGTGGGGAATGGGTGGGTTGAGCTCATGGGTTTGGAGATGGATATTTTGGTCAAGGTGGTAGAGGGGAAGTTGCTAGAAGAACTTGTGGAGGATGCTGTGCTTGATTTGACAGGCAGCGCTTGA 2820 0.4443 MNGVQNRRVHNVEKPFPGCLGRMVNLFDLTAGVSGNKLLTDKPHRDASSLSRSQSDVARITSPSFGDQIEDKLMVSDSMRGSSQNRINGTPIKMLIDQEMSKEIVSKHNPPNVVAKLMGLEALPRGEPNLIMERSYRGDYSQHTCGHSGTPFRHWQLEDRFMDKEMLHEGHPSTEQIAYRDIYEIWLQSQRMNDVRDTKPDEEKWTEDVSAKKMAFIRQKFIEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYELQSTPIAETKRITVLKPSKMVDREKPCGKGKKNDKCVKKPANIGQAAAWEKTSPVYSPASQKVDDYPVQPTRIVVLKPSSGKSHEIKAVLSPTTSSPRNLHGGSLYHGLEDCDALEPTTNTSEITQQMPESLRSHQRDETFHSSVFSNGYIGDESSFNKSDNEYAAGNFSDLELMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASTKGTQEHRHLRRSSTLGEMLALSDMKKVIISEVEDINKDQKPSNSVSCSRNFNEEICMVGSPKNLPRSKSVPVSSTVYETGASVEVCNHDTSKADVSLELTKSKNGSQSPLTDTSVSPVNSRGVRDGESQSFNSGAFAECSLPAVYESSGKSHSDSNGQGVVSLEPAVPGTSTENHDQPSPISVLEPPFEDENAAHESLDCTKGGQLGSRLLLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLVSLDTKVEEQDWFVLVDKLLSAAGLDDQVRSDSFYPRWHSLDSALDPSLRDNYANPDDKESQPLHEARRRQRRSNQKLVFDCVNVALMEISGYGSEKYLRLWGGSSHCMFPVPGGAAPPLVDLIVAQMKDLISGGMRSLWGDCGDSNSLVVESIVRKEVVGNGWVELMGLEMDILVKVVEGKLLEELVEDAVLDLTGSA 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60500g00015 939 MobiDBLite consensus disorder prediction 638 670 - -
Stsc60500g00015 939 MobiDBLite consensus disorder prediction 590 622 - -
Stsc60500g00015 939 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 599 - -
Stsc60500g00015 939 MobiDBLite consensus disorder prediction 789 812 - -
Stsc60500g00015 939 MobiDBLite consensus disorder prediction 638 677 - -
Stsc60500g00015 939 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Stsc60500g00015 939 Pfam DUF761-associated sequence motif 110 124 IPR032795 -
Stsc60500g00015 939 Pfam Domain of unknown function (DUF4378) 753 930 IPR025486 -
Stsc60500g00015 939 MobiDBLite consensus disorder prediction 792 812 - -
Stsc60500g00015 939 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60500g00015 Stsc-Chr60500 95558 99721 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60500g00015 1 936 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.385 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60500g00015 - - gmx:100816611 1400.96