Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60500g00010 ATGCACACGCCTTGGGTGGACGAGGACCTTTCACTGCGTCTCGAGCTTGTTGCTCCTCCATCACTCTCCATGAAGAACACGACGGCTTCAGCACAGCACTACACTGCCTATGAAAGAAAGCCCCAAATTCACCACCTTAGGGATTTCATCTTCGATTTGGATTTTGTACATTTGAAGATGTACAAGACGTCGTCGTTTGGAGGTTGGAAGAGCTGCATCATCCAGCCTGGATCCGTTAACGTTGTTGGGCCCCGTTTCTTGCCACGTCCCCCTTTCCCGTTGCCAGCTGGAGGCTCAACCCAACAGAGGTCTTCATCCGTCCCGTTTTTCAGGAGGTCAAGGACACATAAGATGCTCAGAATAATCCATGGAAAGATGTTGAACAGTGTTGGGATCAAAAATCAAGTTGTGCAAAATGGTAAAGAAGCCATTGATCTTCACCTCTCTGGTCAAACTTTTGACCTAATTCTCATTGACATGGATATGCCTATCATGAATGGCATTCAGACATCTAGGGCTATTCTTACTCACATCAACCTCCTTTTTCGTTATAGCTCTCGTAATGCCAAAGAGCTTAACCATCCGAAGGCACATCTTCTTACTTTGACTATTGAGGCTCGACACCCCATCAAAAAGTCCTTTGGACAATCGTTAAGTGACTTGATCTTAACATTGGCGCCATCTGTGGGGAAAGCTCATGGAAGTTGA 708 0.4619 MHTPWVDEDLSLRLELVAPPSLSMKNTTASAQHYTAYERKPQIHHLRDFIFDLDFVHLKMYKTSSFGGWKSCIIQPGSVNVVGPRFLPRPPFPLPAGGSTQQRSSSVPFFRRSRTHKMLRIIHGKMLNSVGIKNQVVQNGKEAIDLHLSGQTFDLILIDMDMPIMNGIQTSRAILTHINLLFRYSSRNAKELNHPKAHLLTLTIEARHPIKKSFGQSLSDLILTLAPSVGKAHGS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60500g00010 235 Gene3D - 116 212 - -
Stsc60500g00010 235 SUPERFAMILY CheY-like 117 176 IPR011006 -
Stsc60500g00010 235 CDD REC_hyHK_CKI1_RcsC-like 116 174 - -
Stsc60500g00010 235 PANTHER TWO-COMPONENT RESPONSE REGULATOR 117 173 - -
Stsc60500g00010 235 Pfam Response regulator receiver domain 116 177 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60500g00010 Stsc-Chr60500 45626 48589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60500g00010 120 174 Response Regulator Gene Family AT3G04280 37.500 2.58e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc60500g00010 Response_reg 5e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60500g00010 - - twl:119984265 81.2629