Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60499g00016 ATGACATGGTGCAATAGGTCAGTTGTGGAGAGCTCGACGAGGGGAATCGAAATAATCAACCACCCCAGTATCAATATTATTTCAATCCCTAGAAATAATAATAATGACAGTGTTGTTAGTGTTACTCACTCAAATAACCCTAAACCAACCGAAATCAGAACTGTTACTTGCCCCTCTTGTGGTCATAACATTCAATTACAAGATCAGAGTGGGATTCAAGATTTGCCAGGATTGCCAGCTGGAGTGAAATTTGATCCGAATGACCAAGAAATACTCGATCATCTGGATGCAAAAGTGCAGTCTGATGTGAGAAAGCTTCACCCTCTAATTGATGAGTTCATACCAACCCTTGAAGGCGAGAATGGAATTTGTTATACTCACCCAGAGAAGCTACCAGGAGTAAGCAAAGATGGACAAGTGCGTCACTTCTTTCACAGGCCTTCAAAAGCATACACAACTGGAACAAGGAAGAGAAGAAAGGTTCACACCGACGAAGAAGGGAGCGAGACTAGGTGGCACAAAACAGGCAAAACCAGACCCATTTCGGTTGCTGGTTCAGTGAAGGGTTTCAAGAAGATACTTGTTCTCTACACCAACTATGGCAGGCAGAAGAAGCCCGAGAAGACCAACTGGGTCATGCATCAGTACCATCTCGGCTCCAACGAAGAAGAGAAAGACGGCGAGCTCGTCGTTTCAAAGGTTTTCTATCAAACACAGCCTCGTCAGTGCGGAAACTCCCTCATTAACAGTAACAAGGATGCGTATGATGAAAGATTATTGATGACTCACCACCAGCGAAGTAGTCTTGACAACATTATCATTAACAACAGTGTGAATGACATTAGCATTGGCTTACCCAAGAACAGCAACAACAACAGTGCAGGTTTTGTGGATTATTATAATCCCGGCGGTTTCATGAATATGAATTATGAACATATGAATGAGACTATCTCGCCGCAGCTGATTCCGAATATGGTGGTGCAAGGTGACACCTCTTCTTTCATTCGGTTAGCTGCTATGGATGCAAATAAACCCAGGCTGGACAGAAAATAG 1053 0.434 MTWCNRSVVESSTRGIEIINHPSINIISIPRNNNNDSVVSVTHSNNPKPTEIRTVTCPSCGHNIQLQDQSGIQDLPGLPAGVKFDPNDQEILDHLDAKVQSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPISVAGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGNSLINSNKDAYDERLLMTHHQRSSLDNIIINNSVNDISIGLPKNSNNNSAGFVDYYNPGGFMNMNYEHMNETISPQLIPNMVVQGDTSSFIRLAAMDANKPRLDRK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60499g00016 350 SUPERFAMILY NAC domain 72 237 IPR036093 GO:0003677|GO:0006355
Stsc60499g00016 350 ProSiteProfiles NAC domain profile. 78 237 IPR003441 GO:0003677|GO:0006355
Stsc60499g00016 350 Pfam No apical meristem (NAM) protein 79 218 IPR003441 GO:0003677|GO:0006355
Stsc60499g00016 350 Gene3D NAC domain 87 241 IPR036093 GO:0003677|GO:0006355
Stsc60499g00016 350 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 37 265 IPR044799 GO:0003700
Stsc60499g00016 350 MobiDBLite consensus disorder prediction 153 177 - -
Stsc60499g00016 350 FunFam NAC domain-containing protein 73 87 241 - -
Stsc60499g00016 350 MobiDBLite consensus disorder prediction 157 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60499g00016 Stsc-Chr60499 103410 106792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60499g00016 1 250 NAC Transcription Factor Family AT4G28500 66.270 7.52e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Stsc60499g00016 NAM 7.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60499g00016 - - gmx:100783888 462.225