Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60499g00002 ATGTTTGTTCAACTTGCAATCACGTTCTTAGTGATAGCACTCTTCATGTACCTCCGCCCTACTCCGACGGCGAAATCCAAGGCCCTCCGCCACCTCCCAAACCCTCCAAGCCCAAAGCCCCGCCTCCCTTTAGTGGGACACCTCCACCTCTTGGACGACCCTCTCCTCCACAAGTCTCTCATCCGTCTCGCCAAAAAACATGGCCCCATCTTTTCCCTCTACTTCGGCTCCATGCCCACCGTGGTCGCCTCTACCCCTGAACTATTCAAACTCTTCCTCCAAACCCACGAGGCCACCTCCTTCAACACCAGGTTCCAAACCTCTGCCATCCGCCGCCTCACCTACGACAACTCCGTCGCCATGGTTCCCTTCGGACCTTACTGGAAGTTCATAAGGAAGCTGATCATGAACGACCTCCTGAACGCCACCACGGTTGCGAAGCTGAGACCTCTTAGGAGCGAAGAGATCAAGAAAGTGCTCAAGGTTCTTGCACAGAACGCGGAGGCTGAAACAGCCGTCGACGTCACCGAGGAGCTTCTGAAATGGACTAACAGCACCATATCCAGGATGCTGCTTGGGGAGGCAGAGGAGATCAGACACATTGCCCGCGAACTTCTCAAGATCTTCGGCGAGTACAGCGTCTCCGACTTCATCTGGCCCTTGAAAAAGCTCAAAGTTGGCCAGTACGAGAAGAGGATCGACAACATCTTGGGCATGTATGACCCCGTCGTTGAGAGAGTCATCAAGAAACGCCAGGAGATCAGGAGGAGGAGGAAGGAGAGGAATGGCCAGCTCGAGGAAGGCGAACAGGTCGTCTTCCTTGACACCTTGCTTGATTTCGCCGAGGATGAAACCATGGAGATCAAGATCACCAAGGACCAGATCAAGGGTCTCATCGTCGATTTCTTCTCAGCAGGAACAGATTCGACGGCGGTTGCCACAGATTGGGCGTTGGCAGAGCTGATAAACAACCCAAGGGTTCTTGAAAAGGCACGCGAAGAAGTGTACAGCGTGGTTGGGAAAGAGAGACTTGTGGATGAAACAGACATCCAGAACCTTCCATACATCAGAGCCATCGTGAAAGAGACGTTCCGCATGCACCCGCCACTCCCCGTCGTCAAGAGGAAGTGCGTCGCAGAGTGCGAGGTGGACGGTTACGTCATCCCAGAGGGAGCACTCATACTCTTCAATGTCTGGGCCGTCCAAAGAGACCCTAAGTACTGGGAAAGCCCACTGGAGTTCAAGCCCGAGAGGTTCCTCGAGAACTCCGCCGATGGGCCCGTTGACCTCAAGGGTCAACACTTCACGCTCTTGCCGTTTGGGTCCGGGAGGAGGATGTGCCCTGGTGTCAACTTGGCCACTGCTGGAATGGCAACGCTGCTTGCTTCCCTCATTCAGAACTTTGACTTGCAGGTTGTAGGCCCGGATGGAAAGCCCTTGAAGGGTAAGGATAACAGGGCCAGCGTCGAAGAGAGGCCCGGGCTTAGTGTCCCAAGGCTCCAGCACCTTGTGTGTGTTCCGGTTGCCAGGTCCACTGCAGCGGCAAAGCTCCTTTCCTCATAA 1563 0.5483 MFVQLAITFLVIALFMYLRPTPTAKSKALRHLPNPPSPKPRLPLVGHLHLLDDPLLHKSLIRLAKKHGPIFSLYFGSMPTVVASTPELFKLFLQTHEATSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTVAKLRPLRSEEIKKVLKVLAQNAEAETAVDVTEELLKWTNSTISRMLLGEAEEIRHIARELLKIFGEYSVSDFIWPLKKLKVGQYEKRIDNILGMYDPVVERVIKKRQEIRRRRKERNGQLEEGEQVVFLDTLLDFAEDETMEIKITKDQIKGLIVDFFSAGTDSTAVATDWALAELINNPRVLEKAREEVYSVVGKERLVDETDIQNLPYIRAIVKETFRMHPPLPVVKRKCVAECEVDGYVIPEGALILFNVWAVQRDPKYWESPLEFKPERFLENSADGPVDLKGQHFTLLPFGSGRRMCPGVNLATAGMATLLASLIQNFDLQVVGPDGKPLKGKDNRASVEERPGLSVPRLQHLVCVPVARSTAAAKLLSS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60499g00002 520 Gene3D Cytochrome P450 24 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 Pfam Cytochrome P450 36 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 SUPERFAMILY Cytochrome P450 30 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Stsc60499g00002 520 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc60499g00002 520 PANTHER STEROID 21-HYDROXYLASE-RELATED 11 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60499g00002 Stsc-Chr60499 19585 22335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60499g00002 1 515 Cytochrome P450 AT5G06900 36.053 3.49e-110 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60499g00002 - - ag:BAA76380 821.617