Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60497g00015 ATGGCGCCGTCCATTGCAGCATACCTCACGATCATTTTTGCATTGATCACCGTCGTCAACGCTGCAGCATCATCTACCGGATACCACAACCACACCGTAGGCGGCGCGTCCGGGTGGTTGTTCAACTCCACCACCAGTACAGCCGCCACCAACTACACCACTTGGGCTTCAACTCAAACTTTCAACCTCGGCGATTTTCTCATTTTCAAAACGAACACGAATCAAACGGTGGTTCATACCTACAACGAGACGGCTTACCTGAGCTGCGACGCCGACGACTCCGACAACGGCACCTTCGTATACGACAGCGGAAGCACGAGTTTCGGCGAGGCGTTGACTACTTCCGTTCCGTTGACCATCGTAGGAAGCAACTACTTCTTCTCCGACGAGGACGACGGCGTTCAGTGCCGTCATGGCCTAGCCTTCCAGATCAATGTCAACCGCGGCCAAGGCCTGCCTCCCAGCCTCAACCAGCCGCCGCCGCCGCCTTACATTGAGCCGCCGGGCCCTGACGCCGCCGATCAGTCTCCACCGTCCACGATGACCGTATCTCCTACTGGAGGCGCGTCAGCTCTGCGCGTTAACGCGCTCGTGGCGGTTTGTGGATTCGCTGCGGCGAAGTTGATACTGTTACGGTGA 639 0.5759 MAPSIAAYLTIIFALITVVNAAASSTGYHNHTVGGASGWLFNSTTSTAATNYTTWASTQTFNLGDFLIFKTNTNQTVVHTYNETAYLSCDADDSDNGTFVYDSGSTSFGEALTTSVPLTIVGSNYFFSDEDDGVQCRHGLAFQINVNRGQGLPPSLNQPPPPPYIEPPGPDAADQSPPSTMTVSPTGGASALRVNALVAVCGFAAAKLILLR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60497g00015 212 Pfam Plastocyanin-like domain 49 139 IPR003245 GO:0009055
Stsc60497g00015 212 MobiDBLite consensus disorder prediction 154 174 - -
Stsc60497g00015 212 FunFam Early nodulin-like protein 18 28 149 - -
Stsc60497g00015 212 ProSiteProfiles Phytocyanin domain profile. 29 148 IPR003245 GO:0009055
Stsc60497g00015 212 Gene3D - 28 151 IPR008972 -
Stsc60497g00015 212 CDD Phytocyanin 29 146 - -
Stsc60497g00015 212 PANTHER BLUE COPPER PROTEIN 25 172 IPR039391 GO:0009055
Stsc60497g00015 212 SUPERFAMILY Cupredoxins 29 146 IPR008972 -
Stsc60497g00015 212 MobiDBLite consensus disorder prediction 149 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60497g00015 Stsc-Chr60497 104719 105927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60497g00015 1 176 Phytocyanin Superfamily AT1G08500 37.430 2.18e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60497g00015 - - gmx:100783106 273.478