Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60497g00005 ATGTTTGATCATAGCTTTCAACATGTGAGTTTAAGCTTGATCATCACCATTGAACTTGTATGGCAGGACTTCTACATTGTTTTCTTGGGAGCTCATCATACTTTGAATAGTGACATTATACTTGAGACACATTTAAATGTTCTATCTTCTGTGAAGGGAAGCTACCTTGAAGCCAAAGAATCCATGGTTTATAGCTACACAAATAGCTTCAATGCATTTGCTGCCAAACTATCAGAGAATGAAGCCAATAAGTTATCTGACATGGATGAAGTTCTGTTGGTACTTCGAAATCAGTACCGCAAGCTACACACAACAAGATCATGGGACTTCCTTGGTTTACCTCTAACTGCTGAGAGAAGATTGAAATTTGAGAGTGACATTATTGTTGGTCTTTTGGATACAGGGATCACTCCTGAATCTCAAAGCTTCAAGGATGATGGATTAGGTCCTCCACCAGCAAAATGGAAAGGGAGTTGTGATCATTATGCTAATTTCTCAGGATGCAACAACAAGATCATAGGAGCAAAATACTTCAAAGCAGATGGAAACTCTGATCCACTAGACATACTATCTCCCATAGATGTTCTTGGCCATGGCACTCACACTGCATCAACAGCAGCAGGAACTCAGGTTCCAAAGGCAAGCCTCTTTGGCCTGGCTAACGGTACGGCCCGCGGCGCAGTTCCCTCGGCCCGGCTGGCCATTTACAAGGTATGCTGGACACTCAGTGGATGTGCAGAGATGGACATACTTGCTGCATTTGATGCTGCCATACATGATGGAGTGGATATCATATCAATTTCCATTGGTGGAGGTGATCCTAGCTATGTGGTTGATGCTATAGCCATTGGCGCGTTTTTCGCAGTTAGTAAAGGGATAATCACAGTGGCCTCTGCTGGAAATGAAGGTCCAGATATGGCTACCGTGACGAATACTGCACCTTGGATTGTTACAGTTGCAGCCAGTGGCATTGACAGGGCTTTCAGGAGCACTGTGATGTTGGGGAGTGGAAAGAATGTTTCTTGCAAAATTTCAATGCTAATTGCTTTGTGTAAACTTGTATATGTGTATAATTCATCATGGGTGCAAACACCAACCATGGAGATTATGCAGGGAATTGGAGTGGACTGTTTCAATCCAGAACAGAAACAGTATCCTCTCATCAATGGGGCCGACGCTGCTCGGAACTCTGAAGCCAAGGAATATGCTAGATACTGCTTTGAAGACTCCTTAGATCCAAATAAGGTGAAGGGAAAGATTGTTTACTGCAAATTAGGAGCATATGGCACTGAATCAATTGTGAAAGGAATTGGAGGCATTGGTGCCATAATTGAAAGAGAGAGATATCTTGATGTTGCTCAAGTTTTCATGGCTCCTGCTACCATTGTGAATGATAGCTTAGGTGATACTATCACTAGTTATATACATTCCACAAGATCACCATCAGCAGTGATATACAAGACCCATGAAATTAAAAAGCCAGCTCCATTTGCTGCTTCATTCTCATCTAGAGGTCCAAATCCAGGGTCTCAACATATTCTTAAGCCTGATATTGCAGCACCTGGCATTGATATCTTGGCATCTTATACACTTAGGAGATCAATCACTGGCTTGGAAGGGGACACTCAATTCTCAAAATTTACTCTATTATCTGGAACTTCCATGGCTTGTCCTCATGTTGCTGGTGTAGCAGCATATGTTAAGTCATTTCATCCAGATTGGACTCCTGCTGCAATTAGATCTGCCATTATTACCACAGCCAAACCAATGAGTAGGAAAATCAACATTGAAGCAGAATTTGCCTATGGTTCTGGCCAACTAAACCCAACAAGAGCTGTAAACCCTGGTTTAATCTATGACATGGATCAATTTGGTTACATCCAATTCCTATGCCATGAAGGTTACAGTGGTTCCACATTATCAGTGTTACTTGGTTCTCCTGTGAATTGCTCTTCTTATTTGTTTCCTGGTGGTGTTATTGGCTATGATGCCATCAACTACCCCACCATGCAACTCATGTTGAAATCAAACAAAGACACAACAATTGGAGTTTTCAAAAGGACAGTGACAAATGTAGGTCTTGGTCCAGCAACCTACAATGCCAGTATCAAGTCACCAAAGGGAGTTGAAATCACAGTGAAGCCAACTAGCCTCATGTTTTCTCATACCATGCAGAAGAAGAACTTCATATTGGTGGTGAAAGCTAAATCTATGGCAAGTAGGAAAATTCTCTCTGGCTCCCTTTTATGGAGAAGCTCAGTTTACTATGTTAGGAGTCCTATTGTTATTTATAGTCCATAA 2301 0.4185 MFDHSFQHVSLSLIITIELVWQDFYIVFLGAHHTLNSDIILETHLNVLSSVKGSYLEAKESMVYSYTNSFNAFAAKLSENEANKLSDMDEVLLVLRNQYRKLHTTRSWDFLGLPLTAERRLKFESDIIVGLLDTGITPESQSFKDDGLGPPPAKWKGSCDHYANFSGCNNKIIGAKYFKADGNSDPLDILSPIDVLGHGTHTASTAAGTQVPKASLFGLANGTARGAVPSARLAIYKVCWTLSGCAEMDILAAFDAAIHDGVDIISISIGGGDPSYVVDAIAIGAFFAVSKGIITVASAGNEGPDMATVTNTAPWIVTVAASGIDRAFRSTVMLGSGKNVSCKISMLIALCKLVYVYNSSWVQTPTMEIMQGIGVDCFNPEQKQYPLINGADAARNSEAKEYARYCFEDSLDPNKVKGKIVYCKLGAYGTESIVKGIGGIGAIIERERYLDVAQVFMAPATIVNDSLGDTITSYIHSTRSPSAVIYKTHEIKKPAPFAASFSSRGPNPGSQHILKPDIAAPGIDILASYTLRRSITGLEGDTQFSKFTLLSGTSMACPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSRKINIEAEFAYGSGQLNPTRAVNPGLIYDMDQFGYIQFLCHEGYSGSTLSVLLGSPVNCSSYLFPGGVIGYDAINYPTMQLMLKSNKDTTIGVFKRTVTNVGLGPATYNASIKSPKGVEITVKPTSLMFSHTMQKKNFILVVKAKSMASRKILSGSLLWRSSVYYVRSPIVIYSP 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60497g00005 766 PRINTS Subtilisin serine protease family (S8) signature 124 143 IPR015500 -
Stsc60497g00005 766 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Stsc60497g00005 766 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Stsc60497g00005 766 SUPERFAMILY Subtilisin-like 116 614 IPR036852 GO:0004252|GO:0006508
Stsc60497g00005 766 Gene3D - 630 765 - -
Stsc60497g00005 766 Pfam Peptidase inhibitor I9 25 103 IPR010259 -
Stsc60497g00005 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 57 762 IPR045051 -
Stsc60497g00005 766 ProSiteProfiles Serine proteases, subtilase domain profile. 107 613 - -
Stsc60497g00005 766 CDD PA_subtilisin_like 378 485 - -
Stsc60497g00005 766 Gene3D - 325 491 - -
Stsc60497g00005 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Stsc60497g00005 766 Pfam Subtilase family 125 603 IPR000209 GO:0006508|GO:0008236
Stsc60497g00005 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 103 IPR037045 -
Stsc60497g00005 766 Gene3D Peptidase S8/S53 domain 126 623 IPR036852 GO:0004252|GO:0006508
Stsc60497g00005 766 Pfam Fibronectin type-III domain 665 763 IPR041469 -
Stsc60497g00005 766 FunFam Subtilisin-like protease SBT5.3 17 103 - -
Stsc60497g00005 766 CDD Peptidases_S8_3 101 587 IPR034197 -
Stsc60497g00005 766 FunFam Subtilisin-like protease SBT1.5 126 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60497g00005 Stsc-Chr60497 43596 47766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60497g00005 22 601 Subtilisin-like Serine Gene Family AT4G00230 63.276 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60497g00005 - - ccaj:109800351 1063.14