Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60497g00003 ATGATTTCTAGATTACTCTTCATATTCCTGGCACTTATGGTGACAAATTCAAAGGCTATCATGATTCAAAAGACCTACATTGTTCACATGGACAGAACCAAAATTAGAGCCTCCATTCACTCTCAAGACATCTCAAAACCATGGTTTGAATCAGTCCTTGATTTCATTTCTGAATCTTCAACACAAGAACAAGAACAAGAGATTCTACCTCCTCAGCTTCTTTATGCATATGAAACAAACATGTTTGGTTTCGCGGCTCGCCTTTCGCCGAAACAACTCGAATCCTTGAGCCTAGTTGATGGTTTCCTTTCAGCCATGCCTGATGAACTATTAGCACTTCACACAACACACACTCCAAATTTTCTTGGCCTAAAGAGTGGAATAGGCCTCTGGAGTGCTCAAAACTTGGCCTCAGATGTGATAATCGGCATCATCGATTCGGGGATTTGGCCAGAACACATCAGTTTCAAAGATTCAGGCTTGTCCTCTGTACCTTCTCATTGGAAAGGTATTTGTGAACAAGGCACAAAATTCTCTGCTTCAAATTGCAACAAGAAGCTTATTGGTGCAAGGACTTATCTCAAGGGGTACGAAGAATCCGTCGCGAAGATCAACCTCACGACGGATTATCGTTCCCCTAGAGACTCCATAGGCCATGGAACACACACTGCTTCGACCGCAGCCGGTTCCATGGTGAAGAATGCAAGCTTCTATGGCCTTGCTAGTGGTTCAGCAATTGGAATAAGGCAAAGTTCAAGAATTGCAGCCTATAAAGCTTGTTGGCCTGCTGGCTGTGTTACTTCAGACATACTTGCTGCCATGGATCAAGCAGTTTCTGATGGAGTTGATGTGTTATCACTCTCTTTAGGTGGATTTCCAAAGCCTTACTATGTCGATAGCATCGCCATAGCCTCGTTTGGTGCTGCGAAAAATGGTGTTTTTGTTTCTTGCTCTGCAGGTAACTATGGACCTCGCCCTTCTACCGTTGGAAATAGTGCACCCTGGATCATGACAGTTGCAGCCAGCTACACTGACAGGACTTTTCCGACGAAAGTAAGGCTCGGCGGCGGCGAAGTCTTCCGAGGATCTTCGCTTTACCAAGGAAGAAAAACAGGTCAATTGCCTCTTGCTTATGCAAAATCAGCAGGTGCTAATAAAGAAGCACAATACTGCACAGAACACTCACTTGATCAAAGCCTTGTTAAGGGCAAAATTGTTGCTTGTGAAAAAGGACTAAACAGCAGAACTGAGAAGGGAATGGTGGTTAAAAAAGCCGGCGGCGCCGGAATGATACTACTCAACTCAGATAGCCAAGGAGATGAGCTTCTTGCTGATCCTCACATATTGCCAGCAACTTCATTAGGTTTCTCAGAAAGCAACATTGTTAGAAACTATATCCAAACTTCCAGAACTACACCAACAGCTTCAATTTCCTTCCTAGGGACAAAATACGGCGAGCCTGCGCCGGCGATTGCCGCGTTTTCTTCTAGAGGGCCAAACTATTTTGGACTGGATGTGATTAAACCGGATGTTACTGCACCCGGGGTGAACATCTTGGCGGCGTGGCCGGCGAAAACTAGCCCCGGTTTGCTGAAAAGTGACCAAAGAAGTGTTGTGTTTAACATTGTTTCAGGCACTTCAATGTCATGTCCTCATGTTAGTGGCATAGCTGCATTGATCAAATCTGTTCATAGAGATTGGTCTCCTGCTGCCATAAAATCTGCACTGATGACTACTGCATACACATTGAACAATAAAGGCGATCCGATCGCGGATACCGGATCGAATAGTTCTTCTGCTTTTGCTACTCCTTTTGCTTTTGGTTCTGGCCATGTTAACCCAGAAAATGCATCTGATCCAGGGTTAGTGTATGATATAAGCACAAAAGATTATTTGAATTACTTATGTAGCCTTAACTATACTGATTCTGAGATTGCTTTGGTGTCAAGAAAGACTTTTGTGTGTCCTAAAAATTCAGATCTTCAGGTTGGTGACTTGAATTACCCTTCATTTTCTGTTCTATTTGATAGATTTATACAAAATTCTAGTGTGACATACAAGAGGGTTGTCACAAATGTTGGAAAATCAGAGAGTGCTAATTATGTGGTTAGTGTTGAACAGCCAAGTGGAGTTTCAGTTAGTGTTGAACCAAGGAAACTGAAATTTAAGAAAATTGGACAGAAATTGAGGTATAGTGTGACATTTTCATCAATTGGAAAAAGATTGAGAGTTTCTGGTTCCAATTCATTTGGATCATTGACTTGGGTTTCTGGGGGATATTACAAGGTTAGGAGTCCTATTGCTGTAACATGGCAATAG 2319 0.4278 MISRLLFIFLALMVTNSKAIMIQKTYIVHMDRTKIRASIHSQDISKPWFESVLDFISESSTQEQEQEILPPQLLYAYETNMFGFAARLSPKQLESLSLVDGFLSAMPDELLALHTTHTPNFLGLKSGIGLWSAQNLASDVIIGIIDSGIWPEHISFKDSGLSSVPSHWKGICEQGTKFSASNCNKKLIGARTYLKGYEESVAKINLTTDYRSPRDSIGHGTHTASTAAGSMVKNASFYGLASGSAIGIRQSSRIAAYKACWPAGCVTSDILAAMDQAVSDGVDVLSLSLGGFPKPYYVDSIAIASFGAAKNGVFVSCSAGNYGPRPSTVGNSAPWIMTVAASYTDRTFPTKVRLGGGEVFRGSSLYQGRKTGQLPLAYAKSAGANKEAQYCTEHSLDQSLVKGKIVACEKGLNSRTEKGMVVKKAGGAGMILLNSDSQGDELLADPHILPATSLGFSESNIVRNYIQTSRTTPTASISFLGTKYGEPAPAIAAFSSRGPNYFGLDVIKPDVTAPGVNILAAWPAKTSPGLLKSDQRSVVFNIVSGTSMSCPHVSGIAALIKSVHRDWSPAAIKSALMTTAYTLNNKGDPIADTGSNSSSAFATPFAFGSGHVNPENASDPGLVYDISTKDYLNYLCSLNYTDSEIALVSRKTFVCPKNSDLQVGDLNYPSFSVLFDRFIQNSSVTYKRVVTNVGKSESANYVVSVEQPSGVSVSVEPRKLKFKKIGQKLRYSVTFSSIGKRLRVSGSNSFGSLTWVSGGYYKVRSPIAVTWQ 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60497g00003 772 FunFam subtilisin-like protease SBT1.5 345 484 - -
Stsc60497g00003 772 CDD PA_subtilisin_like 352 477 - -
Stsc60497g00003 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 769 IPR045051 -
Stsc60497g00003 772 Gene3D - 345 484 - -
Stsc60497g00003 772 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Stsc60497g00003 772 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Stsc60497g00003 772 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Stsc60497g00003 772 Pfam PA domain 375 458 IPR003137 -
Stsc60497g00003 772 FunFam Subtilisin-like protease SBT1.5 635 772 - -
Stsc60497g00003 772 CDD Peptidases_S8_3 113 581 IPR034197 -
Stsc60497g00003 772 Pfam Peptidase inhibitor I9 25 113 IPR010259 -
Stsc60497g00003 772 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Stsc60497g00003 772 SUPERFAMILY Subtilisin-like 113 622 IPR036852 GO:0004252|GO:0006508
Stsc60497g00003 772 Gene3D Peptidase S8/S53 domain 139 631 IPR036852 GO:0004252|GO:0006508
Stsc60497g00003 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 114 IPR037045 -
Stsc60497g00003 772 Pfam Fibronectin type-III domain 665 769 IPR041469 -
Stsc60497g00003 772 Gene3D - 635 771 - -
Stsc60497g00003 772 FunFam Subtilisin-like protease SBT1.5 139 355 - -
Stsc60497g00003 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Stsc60497g00003 772 Pfam Subtilase family 138 589 IPR000209 GO:0006508|GO:0008236
Stsc60497g00003 772 ProSiteProfiles Serine proteases, subtilase domain profile. 121 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60497g00003 Stsc-Chr60497 18508 21251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60497g00003 23 772 Subtilisin-like Serine Gene Family AT1G01900 53.928 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60497g00003 - - ahf:112797343 1350.88