Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60496g00011 ATGGCTTTGAGTTGGCCGCTCCTACTGCGGTTCCGTTCTCAACAACCTCTGCTCGCTCCAACTAACTTTGCCGCCTACTCCGATCTCGCTGAACCGCATGCTTTTGACGCTCCGTGTGTTGCTTCCTTTAATCCACTGAACCGGAGCAATGTTTCGGCTCCGGCGCTGAAACTGAAGGTTCTAGCGCCCTACGTCGTCAAATGTCTCGCCAGATCCACAGAGGAGAAGCAATGGAGCGACGCCGAGACAGTCGTTTCTGATTCCGATGAAGCTGCTTCTGAGGACGACGGAAACGGTCAGCTTCGGAGTCAAACCTCTGCTGCTTCGGAGACTGATCGTGTTGAATCTCCGAGAGTTGCGACTACCTACTCCGGCGACTCTCTTTCGCTCGGAATTCGAGAACCGGTTTACGAAGTTGTAGAAGTGAGATCAGATGGAACAGTATCGACAAGAAAAATCAACAGGAGACAATTGTTGAAATCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCGTCGTTGTTTTTGACGAATTCGATGCCCTCTTTGCTGGTTCGTGAGTATGCCATACTTCTAAATCTTGGTTCACTTCGAGCAATAGCAATGAAAGATTGCGTACTTATATTTGACTACAATCGTAAAGGAGGGCAAGCTTTTCTGGAGTCATTGTTGCCCAGGTTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCGTTTGAACTTGAGGTGCAAGCTCTTCTTGAAGCCTTGCCAAATCGATTAACAGGTGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAATTAGGTTCTAGGGCTGGCGCTCTTAGACAGATGCTGCTCGACCTTTTGGAAGATCCCCATGAAATACGCCGTATATGTATTATGGGAAGAAACTGCACGCTTACAAAAGGAAACAATTTGGTCGAATGCTCTCTGCCCTTAGAGAAGCAGATTGCCGAAGAGGAGGAGGAGGAAATTGAGATGCTTCTTGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCAGTTAGTTTGAGCTCGCGAAGGCTTGAGGTTAGCCGAGTGGAACTGCTTCTCCAAGTGGGAACATTCTGTGTGGCAGTTGGTGCACTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCATATCTTGAAGAACATGTGTTTGCATTTTGGCTGACAACAGCTGGAATAATTGTTGGTGCCGTTGTGGCTTTTTTCCTTATGTATTACTACCTTAAGGCAAGGAAAATATTTTGA 1332 0.4632 MALSWPLLLRFRSQQPLLAPTNFAAYSDLAEPHAFDAPCVASFNPLNRSNVSAPALKLKVLAPYVVKCLARSTEEKQWSDAETVVSDSDEAASEDDGNGQLRSQTSAASETDRVESPRVATTYSGDSLSLGIREPVYEVVEVRSDGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFELEVQALLEALPNRLTGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTLTKGNNLVECSLPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAVVAFFLMYYYLKARKIF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60496g00011 443 Gene3D Magnesium transport protein CorA, transmembrane region 215 369 - -
Stsc60496g00011 443 MobiDBLite consensus disorder prediction 79 120 - -
Stsc60496g00011 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 108 246 IPR039204 -
Stsc60496g00011 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 379 434 IPR045863 -
Stsc60496g00011 443 Pfam CorA-like Mg2+ transporter protein 323 434 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc60496g00011 443 CDD Mrs2_Mfm1p-like 139 442 IPR039204 -
Stsc60496g00011 443 Coils Coil 323 343 - -
Stsc60496g00011 443 Gene3D Magnesium transport protein CorA, transmembrane region 370 442 - -
Stsc60496g00011 443 MobiDBLite consensus disorder prediction 97 120 - -
Stsc60496g00011 443 Gene3D - 132 213 - -
Stsc60496g00011 443 FunFam Magnesium transporter MRS2-11, chloroplastic 132 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60496g00011 Stsc-Chr60496 63958 68117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60496g00011 130 443 MRS2 Gene Family AT5G22830 79.228 3.02e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60496g00011 K16075 - gmx:100808371 630.557