Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00024 ATGGCTAACAAGGTGAATCAACATGATAATAAAGCAGTGCAGTTGATAGACAAGTGCCAAGTTGGTCCTCCACCAGGTTCGGTTCCTTCTCCAACCTCAATTCCTCTTTCTTTCTTTGACCTTCCATGGCTATCTTGTCCAGGATCATGTAAACGCATTTTCTTCTATGACTTTCCTTACTCCACAACACACTTCTTACAAGAACTACTTCCAAATCTCAAACAATCACTCTCTCTCACTCTCAAACACTTTCTTCCACTCTCTTCCACCGTAGTTTTCCCTCCAAAGCCACAAACTCCTCACTTCCTCTACTCTCAAGGTGACACTTTAACTTTTACAGTTTTTGAGTCCACAACAACAAATCTTAACAACCTCATATCTCACACACCAAGAAATGTCAAATGCTTGGATCCTTTTGTTCCCATTTTGCCCTCACCACGTGCCTTAGAAGATGGCACCCTGTTGATCCCTCCTATGGCTATTCAAGTAACTGTTTTTCCAAATTCTGGTTTCACCATCTGCATCACTTTTAGCCATGTGGTTGCTGATGGAAGAGCCTTTCATAATTTCATCAAGTTTTGGGCCTCACTTTGTATGTCAAAAACTAGGGACTACTTATGTTCTTCCCTTATGGAAGGCTCATCACTCTCTCCTCCATTCCTTGATAGGGACAAAATTGGAGATCCAAATGAACTCAAGTCTATTTTCTTAGAAAAATTGTGGAACATGCCCTTAAGTAGCATAGGTCACATGGATTTTGTTCCTAAAATTAATGACATGGTTCGACATACTATAGTTTTGAGGCCTGACCAAATTGAAAATTTGAAGAAATTAGTGTCCATGAAGTGCCAAAGCTTTGGTCTAGGGACACTATTCCACGTGTCAACATTTGTGGTGACATGCTCTTTGATCTGGATATGTAATGCTAAATTAGAATTTATTACCCAAGTTGGTGGTGATGAATTTCCTAATGAAGATGAAGAAAGATACATGATGATCTTGGCAGATTGTCGTTACCTTAGTGAAATGAAAATTCCCTTAACATACTTTGGGAACTGTTTGATTCTTGCCTTAGCAACAATCAAGAGGAGCAAGCTAGTGGGGCAAAATGGTCTTTTCGAGGCAGCTATTGCCATTGGAAGTAAAGTTAGAGAATTGCAATGTGAACCTTACAAAGGTGTTGAAAGATTGATGTCCATGTTTAGGAATATTGCTGCAATGAGGCATCGTGTGTTGGGTATTGCAGGTTCACCAAAGCTTGGTGTGTATGAGAGTGACTTTGGATGGGGAAAACCCAAATTGAGTGAAGTAGTTCATGTAAATTCTGGAGGAGTATTCTCACTCTCTGATTGTAGAGACATAGAAGGTGGTGTTGAAGTTGGGATAGCACTTGAGAAGAGTCACATGCACAAATTCAACATCATGTTGAATGAGCTCCTTACAAATCTTGCAGTAGTTCATCAAGTTTGA 1470 0.3993 MANKVNQHDNKAVQLIDKCQVGPPPGSVPSPTSIPLSFFDLPWLSCPGSCKRIFFYDFPYSTTHFLQELLPNLKQSLSLTLKHFLPLSSTVVFPPKPQTPHFLYSQGDTLTFTVFESTTTNLNNLISHTPRNVKCLDPFVPILPSPRALEDGTLLIPPMAIQVTVFPNSGFTICITFSHVVADGRAFHNFIKFWASLCMSKTRDYLCSSLMEGSSLSPPFLDRDKIGDPNELKSIFLEKLWNMPLSSIGHMDFVPKINDMVRHTIVLRPDQIENLKKLVSMKCQSFGLGTLFHVSTFVVTCSLIWICNAKLEFITQVGGDEFPNEDEERYMMILADCRYLSEMKIPLTYFGNCLILALATIKRSKLVGQNGLFEAAIAIGSKVRELQCEPYKGVERLMSMFRNIAAMRHRVLGIAGSPKLGVYESDFGWGKPKLSEVVHVNSGGVFSLSDCRDIEGGVEVGIALEKSHMHKFNIMLNELLTNLAVVHQV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00024 489 Gene3D - 257 482 IPR023213 -
Stsc60492g00024 489 Pfam Transferase family 32 473 - -
Stsc60492g00024 489 Gene3D - 13 249 IPR023213 -
Stsc60492g00024 489 PANTHER - 13 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00024 Stsc-Chr60492 123591 125060 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00024 125 479 Monolignol Biosynthesis Gene Families AT5G48930 22.454 1.49e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00024 - - ahf:112729058 669.077