Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00022 ATGGCTAACAAGGTGAATGATGATACAGTTGTGAAGATCATAGAGAAGTGCCAAGTTGGTCCTCCACCAGCTTCTGTTCCTTCAACCTCTCTTCCCCTTACTTTCTTTGATATTCCATTTCTAAGCTGTCCTGTTACATGTACACGCATCTTCTTCTATGAATTACCTCACACCACAACAACACACTTCTTGCAAACACTGCTTCCAAATCTCAAACACTCACTCTCACTCACTCTTCAACACTTCTTTCCTTTCTCTTCAAAAATAGTATTCCCTCCAAAGCCACAAACCCCTCACATTCTCTACTCACAAGGTGACACTCTTCCTTTCATAGTTGCTGAGTCCACTACAAATTTCAACAACCTCGTATGTAACATCCCAAGAGACGTTACATCCTTGTACCCTATTGTTCCTGACTTGCCTCAAACGCGTGCCTTAGAAGATGGCACCTTGTTGATCCCTCCCATGGCAATTCAAGTCACTGTTTTTCCCAACTCTGGCTTCACTATCTGCATCAACTTCAGGCATGCGGTTACTGATGGAAAAGCCTTTCACAGTTTCATCAAGATGTGGAGCTCAATGTGTGGTGGGTCTAAAGAGAAGAATCTTTTTGCTCTGCCATTGCATGACAGAGACATCATTCAAGACCCAAATGGGTTTAACCCCATTTTCTTAGATTCACTGTGGAATTTTCCAAGAGAATTCATCATGAACCCTATCTATAACATCCCTAATGACAATGTTCGCCACAGGCTTGTGTTGAAGAGTGAACATGTTGAGAATTTGAAGAGATTGGTGTCAGCTAAATACCAAAGCCTTGGTCTAGAAACATCACTACATGTGTCAACTTTTGTTGTGACATGTGCTTTGGTTTGGGTTTGTAAGGTCAAATCATCATCAGAAGATAATATAAGAAGTGGTGATGACGATGATGAAGAATTATACCTCACGTTTTGGGTGGATTGTCGTTACCTTGCTGAATTGAAAATTCCATTAACATATTTTGGAAATTGTTTGGTTAATGGCATTGCAGCAGTTAAGAGAAGCAAGCTAGAGGGGCAAAATGGTATTTTTGAAGCAGCTATTGCCCTTAGAAGCAAAATAAAAGAATTGCAATGTGAACCTTATAAAGGTGCTGAAACACTTATGTCAGTTTTTGGTAAATTTGCGACAATGGGACATCGTATGACGGGAATTGCAGGTTCACCAAAGTTGGGTGCATATGAAAGTGATTTTGGGTGGGGGAAGCCAAAATTAAGTGAAGTTCTTCATGTGAATTCTGCAGAGTTGGTGTCTCTGTCTGATTGTAGGAACAAAGAAGGTGGGATTGAAGTTGGTGTAGCATTTGGGAGGGCTCAAATGCAAAAATTCAACGCTATTTTGGAAAAGATCCTTGAAGATATTGCAGTTCATGATTGA 1419 0.4052 MANKVNDDTVVKIIEKCQVGPPPASVPSTSLPLTFFDIPFLSCPVTCTRIFFYELPHTTTTHFLQTLLPNLKHSLSLTLQHFFPFSSKIVFPPKPQTPHILYSQGDTLPFIVAESTTNFNNLVCNIPRDVTSLYPIVPDLPQTRALEDGTLLIPPMAIQVTVFPNSGFTICINFRHAVTDGKAFHSFIKMWSSMCGGSKEKNLFALPLHDRDIIQDPNGFNPIFLDSLWNFPREFIMNPIYNIPNDNVRHRLVLKSEHVENLKRLVSAKYQSLGLETSLHVSTFVVTCALVWVCKVKSSSEDNIRSGDDDDEELYLTFWVDCRYLAELKIPLTYFGNCLVNGIAAVKRSKLEGQNGIFEAAIALRSKIKELQCEPYKGAETLMSVFGKFATMGHRMTGIAGSPKLGAYESDFGWGKPKLSEVLHVNSAELVSLSDCRNKEGGIEVGVAFGRAQMQKFNAILEKILEDIAVHD 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00022 472 Gene3D - 243 467 IPR023213 -
Stsc60492g00022 472 Gene3D - 10 240 IPR023213 -
Stsc60492g00022 472 PANTHER - 11 466 - -
Stsc60492g00022 472 Pfam Transferase family 11 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00022 Stsc-Chr60492 112267 122737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00022 50 464 Monolignol Biosynthesis Gene Families AT5G48930 21.678 6.23e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00022 - - ahf:112729058 553.903