Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00021 ATGGATAATCACAAAGTGAAGGTGTTAGAACAGTGCAAAATCGGTCCTCCACCAGGTTCGGTTTCTTCAACTTCTATTCCCCTTACTTTCTTTGATATTCCATGGCTATGTTGTCCTCCAATCAAACGCATTTTCTTCTATGAATTCCCTTACCCCACAACACACTTGTTACAAAAAGTGCTTCCAAATCTGAAACAATCACTTTCACTCACTCTCAAACACTTCTTCCCTTTCTCTTCTAACATTGTCTTCCCTCCAAAGCCACAAACCCCTCACATTCTCTACAAAGAAGGGGACACTCTTCCCTTCATAGTTGCTGAGTCCACAACAAACTTCAACAACCTCGTATCCGACACACCAAGAGATGTCACGTGCTTGCACCCTTTTGTTCCTGTTTTGCCCTCACCACGTTTCTTAGAAGAAGATCAAACCTTGTTGATTTCACCTATGGTCGTTCAGGTCACTATCTTCCCCAACTCTGGCTTCGCCATCTGCATCTCTTTGAGACACGTGGTTGCTGATGGCAGAGCCTTTCATCACTTCATGAAGTTTTGGGCCTCACTTTGTGGGTCTAAAGTGGGCCTTGATGTACCATTACATGATAGGGGTATGATCCAAGATCCAAATGGGCTCAGGCCCATTTTCCTAGAAGCTATTTGGAACATCCCTATTAAAACCATGGAGTCCACAGGCCAAGTTAATAATGTTCCTAGTGACATGGTGAGGCGCACGTTTGTGTTGAGGAGTGAGCATGTTGAGAATTTGAAGAAATATGTGTCTGCTAAATGCAAAAATAATGGTCTAGAGACATTGCATGTTTCAACATTTGTGGTGACATGTTCTTTGATTTGGGTTTGTAAGGTGAAGTCAGAAGATAGTGACAAAGACGATGGTGTTACACTTTCCAATAATGATGATGAATTACACATCTTTGCAATTATGGCAGATTCTCGTAACCTTCCTCAATTTTCAATTCCATTAACATACTTTGGTAATTGTGTGGTTTGTGGGAATGCAGAAGTTACAAGGGGGAAATTAGTTGGACAAAATGGTATTTTTGAAGCTGCCATTGCTATTGGAAGCAAAATTAGGTGCTTGAAATATGAAGGCTATAAAGGAGCTGAGACATTGATGTCAAATTTTACAGAGTTTGCCACGTTGGGGAAGCATATGTTATTAACTGCAGGGTCACCAAAGTTGGATGTGTATGAAACTGATTTTGGGTGGGGAAAGCCTAAGATGAGTGAAGTAGTTCAAGTAGAGTCTTCAATGTCAATTTCACTCTCTGATTGCAAGGACAAAGGTGGAATTGAAGTTGGGATTGCACTTGGAAGGACTCAAATGATGAAATTCAATACCCTTTTGGAAGAGTTCCTAGCACAAATTGCAGTTCATCATGAGTCATGA 1407 0.4108 MDNHKVKVLEQCKIGPPPGSVSSTSIPLTFFDIPWLCCPPIKRIFFYEFPYPTTHLLQKVLPNLKQSLSLTLKHFFPFSSNIVFPPKPQTPHILYKEGDTLPFIVAESTTNFNNLVSDTPRDVTCLHPFVPVLPSPRFLEEDQTLLISPMVVQVTIFPNSGFAICISLRHVVADGRAFHHFMKFWASLCGSKVGLDVPLHDRGMIQDPNGLRPIFLEAIWNIPIKTMESTGQVNNVPSDMVRRTFVLRSEHVENLKKYVSAKCKNNGLETLHVSTFVVTCSLIWVCKVKSEDSDKDDGVTLSNNDDELHIFAIMADSRNLPQFSIPLTYFGNCVVCGNAEVTRGKLVGQNGIFEAAIAIGSKIRCLKYEGYKGAETLMSNFTEFATLGKHMLLTAGSPKLDVYETDFGWGKPKMSEVVQVESSMSISLSDCKDKGGIEVGIALGRTQMMKFNTLLEEFLAQIAVHHES 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00021 468 Gene3D - 5 231 IPR023213 -
Stsc60492g00021 468 Pfam Transferase family 21 454 - -
Stsc60492g00021 468 Gene3D - 236 461 IPR023213 -
Stsc60492g00021 468 PANTHER - 6 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00021 Stsc-Chr60492 109207 110613 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00021 115 462 Monolignol Biosynthesis Gene Families AT5G48930 25.000 1.72e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00021 - - gmx:100782335 615.15