Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00019 ATGGAGAAGAAGGTGAATCATGATGAAATATTGAAGGTGATAGAGCAGTGCCAAGTAGGTCCTCCACCAGGTTCTGTTCCTCCAACCTCTGTTCCCCTTTCTTTCTTTGATTTTCCTTTTTTATGCTTGCCTGTAACATGCAAACGCATTTTCTTTTATGAATTCCCTTACCCCACAACACACTTGTTACAACAAGTGCTTCCAAAGCTCAAACAATCACTTTCACTCACTCTCAAACACTTCTTCCCTTTTTCTTCAAAAATAGTATTCCCTCCAAAGCCACAAACCCCTCACATACTCTACTCAGAAGGTGACACTCTCACTTTCATAGTTGCTGAGTCCACAACAACTAATCTCCACAACCTCGTATCTGACACAACAAAAGATGTCACGTGCTTCCACCCTTTTGTTCCAATGTTGCCTTCTCCACGTGCCTTAGAGGATGGAACCTTGTTGATTCCTCCCATGGCTATTCAAGTCACTATCTTCCCTAACTCTGGCTTCGCCATATGCACCAATTTCAGTCACGTGGTGGTGGATGGGAAGGCATTTCATCACTTCATGAAGTTTTGGGCCTCACTTTGTGGCTCTAAAGAGAACATTGTTGCTCTGCCATGCCATGATAGAGACATGATCAAAGACCCAAAGGGGTTTAAGCCTATGTTCTTAGAAACAGTGTGGAATTCTCCAAGAGAAAGGTTCATGAGCCTCGGCCATAATCTTCCTAGTGACAATGTTCGCCGCACTTTTGTGTTGAGGCGCGAACAAGTTGATAATTTGAAGAAATTTGTGTCTGCTAAGTGCCAAAACCATGGTCTAGGAACATTACATTTGTCAACCTTTGTTGTGACATGCTCCTTGATCTGGGTTTGTAAGGTAAAATCTGAAGAAATTAAGAATGATGAAGAACTATACATATGTCCTTGGTTAGATTGTCGTAACATTGCTGAATTGAGAATTCCCACAACATACTTTGGAAATTGTTTGGTTAATGGCATTGCCGCAATCAAGAGGAGCAAGCTAGTTGGGCAAAATGGTATTTTTGAAGCTGCTGTTGCTATTGGGAACAAAGTTAGAGAATTGCAATCTGAACCTTATAAATGTGTTGAATCATTAATGTCAAGTTTTAGTAAATGGTCGCTTGGTGTGCTGGGAATTGCAGGGTCTCCAAAGTTGGATGTGTATGAAACTGATTTTGGGTGGGGAAAACCCAAATTGAGTGAAGTAGTTCAGCTAGATTCTCAATTGGTGTCCCTCTCTGATTGTAGGGGAAAAGAAGATGGAATTGAAGTTGGTGTAGCACTTGGGAGGACTCACATGCTTAAATTCAACACCATTTTAGAAGAGCTTCTGCAAAAAATTCTAGTCAATGACTAA 1377 0.4118 MEKKVNHDEILKVIEQCQVGPPPGSVPPTSVPLSFFDFPFLCLPVTCKRIFFYEFPYPTTHLLQQVLPKLKQSLSLTLKHFFPFSSKIVFPPKPQTPHILYSEGDTLTFIVAESTTTNLHNLVSDTTKDVTCFHPFVPMLPSPRALEDGTLLIPPMAIQVTIFPNSGFAICTNFSHVVVDGKAFHHFMKFWASLCGSKENIVALPCHDRDMIKDPKGFKPMFLETVWNSPRERFMSLGHNLPSDNVRRTFVLRREQVDNLKKFVSAKCQNHGLGTLHLSTFVVTCSLIWVCKVKSEEIKNDEELYICPWLDCRNIAELRIPTTYFGNCLVNGIAAIKRSKLVGQNGIFEAAVAIGNKVRELQSEPYKCVESLMSSFSKWSLGVLGIAGSPKLDVYETDFGWGKPKLSEVVQLDSQLVSLSDCRGKEDGIEVGVALGRTHMLKFNTILEELLQKILVND 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00019 458 Gene3D - 10 237 IPR023213 -
Stsc60492g00019 458 Gene3D - 241 454 IPR023213 -
Stsc60492g00019 458 PANTHER - 11 452 - -
Stsc60492g00019 458 Pfam Transferase family 27 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00019 Stsc-Chr60492 104351 106035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00019 50 450 Monolignol Biosynthesis Gene Families AT5G48930 21.564 4.27e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00019 - - ahf:112729058 531.946