Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00015 ATGATCGCATTGAAGGTGATGACTCGGGACTCCATCCAAGCTTCCCTTGAATTCAAGAAGGAAATTGAGATGCTATGTCAGCTTCATCACCCTAACTTGATATCTCTTATAGGCTTCTGCAACCAAGAAAAGGAAAAGATTGGTGTGTACGAGTACATGGCGAATGGAACACTCAGTGATTACTTGAGTGACAGGAACAAGGAACCACTTTCATGGAACAAGAGACTAGACATCTGCATTGGAATAGCAAGTGCTCTACACTACCTTCATTCAGGAGCCAAGCGTAGTATCTTCCATCGTGATGTAAATCCAAGTAATATTCTCTTGGACAAGAATATGAAGGCAAAGCTTGCAAATTTTACTATATCGTTGCAGGGAGCCCTCTCTACATTGAAGCCAAAGGAAATTAAAGTAGATAAGATTGTAGGTACATCTGCATTGATGGCTCCTGAGTATGCCATGCATGAGCACACTCTTGAGGAGACAATGGATCCAACTCTGAAAGGAAAGGTTGCAGCTGAGAGTTGGAAAGTATTTAGCAATGTGATACAAAGTTGCTTGGAGTATGAAGCAGATGAGCGACCAACAATGGGGGAAGTAGAGGTATTGCTTGAGCATGCTCTCTCATTGCAGCAACAAGCTGATGTTACAAACAATGCTGCTCATTGTTATACCTTATCATCCACTACCCCTTGTTTGAGTTGTCGAGAGCGCTATAATGAGCATGCTTTAGGACTACAAGAGTCAAGAGGAAGCAAATGGCATTATTAG 771 0.4215 MIALKVMTRDSIQASLEFKKEIEMLCQLHHPNLISLIGFCNQEKEKIGVYEYMANGTLSDYLSDRNKEPLSWNKRLDICIGIASALHYLHSGAKRSIFHRDVNPSNILLDKNMKAKLANFTISLQGALSTLKPKEIKVDKIVGTSALMAPEYAMHEHTLEETMDPTLKGKVAAESWKVFSNVIQSCLEYEADERPTMGEVEVLLEHALSLQQQADVTNNAAHCYTLSSTTPCLSCRERYNEHALGLQESRGSKWHY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00015 256 PANTHER OS07G0166700 PROTEIN 155 211 IPR045272 GO:0004714|GO:0006468
Stsc60492g00015 256 PIRSF ILK 153 219 - -
Stsc60492g00015 256 PIRSF ILK 1 165 - -
Stsc60492g00015 256 Pfam Protein tyrosine and serine/threonine kinase 2 156 IPR001245 GO:0004672|GO:0006468
Stsc60492g00015 256 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Stsc60492g00015 256 SUPERFAMILY Protein kinase-like (PK-like) 2 204 IPR011009 -
Stsc60492g00015 256 Gene3D Transferase(Phosphotransferase) domain 1 156 229 - -
Stsc60492g00015 256 Gene3D Transferase(Phosphotransferase) domain 1 54 155 - -
Stsc60492g00015 256 ProSiteProfiles Protein kinase domain profile. 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00015 Stsc-Chr60492 86459 87325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00015 2 232 Receptor kinase-like Gene Family AT4G39110 34.892 3.70e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Stsc60492g00015 PK_Tyr_Ser-Thr 3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00015 - - adu:107486243 324.709