Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00013 ATGGTCCCCAAAATTACAGATTTTGGTTTATCATTGCAGGGAGCACTCTCTACATCAAAGCCAAAAAGGATTCAAGTAGATCAGGTTGTAGGTACATTTGGATACTTAGCTCCTGAACACCACCTGCATGCTGTTGTTACTGATAAAACTGATGTTTACTCCTTTGGTATGGTTCTAATACACGTGGTGACCAATGCCGATCGGGTCCACCTCTTAATGGAAGATCAAGAGGACCCCATCACCACCACTCTTGAGGAGAGAATAGATCCAATTCTAAAAGGGAAGATTGCGCCACAAAGTTGGCAAGTTATCACTAATGTGATACAAAGTTGCTTGGAGTATGAAGCAGATGAGCGACCAACAATGGGGGAAGTAGAGGTGTTGCTTGAGCATGCTCTCGCATTGCATAAACAAGCTGATATTACAAACATCAATAATGCTGCTCACTATACTTTATTATCCACTACTCACTTGTCAGATTTATTCAGACTTTCAAGGTTTATGAATAACGGTGATCAGATTTATTCAGACTTGTAA 537 0.406 MVPKITDFGLSLQGALSTSKPKRIQVDQVVGTFGYLAPEHHLHAVVTDKTDVYSFGMVLIHVVTNADRVHLLMEDQEDPITTTLEERIDPILKGKIAPQSWQVITNVIQSCLEYEADERPTMGEVEVLLEHALALHKQADITNINNAAHYTLLSTTHLSDLFRLSRFMNNGDQIYSDL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00013 178 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60492g00013 178 Pfam Protein tyrosine and serine/threonine kinase 4 126 IPR001245 GO:0004672|GO:0006468
Stsc60492g00013 178 Gene3D Transferase(Phosphotransferase) domain 1 1 155 - -
Stsc60492g00013 178 PANTHER OS07G0166700 PROTEIN 1 136 IPR045272 GO:0004714|GO:0006468
Stsc60492g00013 178 SUPERFAMILY Protein kinase-like (PK-like) 2 160 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00013 Stsc-Chr60492 80717 81253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00013 1 145 Receptor kinase-like Gene Family AT5G39000 37.419 1.58e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc60492g00013 PK_Tyr_Ser-Thr 1.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00013 - - adu:107486591 184.111