Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00011 ATGGGTTTTCCTTTCTTTTCAAGCTTGTCTTGTTTTGGAGACTCAAGTCCAAAAAGGGTGACAAACCGATCATCTTCTGATACAACACTCATCTCAACAGAACCACCTTCCTCCATCATAACTGAACTCTGCCACCAGTTTACACTTGCAGAGATACAATCAGTGACAAGAAACTTCGAAAAGTCGTTGGGAGAAAGCAGGTTTGGTATTGTTCACAGAGGCTATGTAGGAGATACTTCTAAACCAGTTGCTGTAAAGAAGTACAAGAAGGACTCAGGTTTTGGTTTCTTGGAGTTCAAGAATGAGGTTGTCTTGCTTTCGCAGCTGCACCACCCCAACCTCGTCTCTTTGGTTGGGTTTTGTGTTGAAAGAAATGAGTTAATTCTTGTAAATGAGTTGCTGTCTAAGGGTAATCTTTATCATCATCTTCATGGTCGAAATATTCGTCCACTTCCATGGAAGAGGAGGCTACAGATTTGCATAGGCGTCGCACGCGGACTTCATTATCTTCACACTGGAGCCAAGTATATTATAATTCACCATGACATCAAGACAAGTAACATTCTTTTAGATGATAATTTAGAGCCTAAAATTTCAGGTTTAACACTGTCCAAAAGGGTATCTCTTAGAAGCTCAAAGTCAATGAAAATGACTGAGTCAGATGTAAAAGGAACATATGGATATAAAGATCCAGAATATGTAAGAACTGGAGTTCTTACTGAAAAATCAGATATATATTCTTTCGGTGTAGTTCTGTTAGAAGTTTTGACTGCAAAGCCGCCACGGGAGATTTACAGGGAACACTTGGAAAACTGCAATCAGACCCTCGAGTTGTATGCAGAGAAAAATGTTGATCGGTTTCTTAAGTCAAAGATTGCTCCAGAATGTTGGAAAATATTTGTTGACATCACTGAGAGATGTTTGAAAGCAGAGGGAAGGGAGAGGCCAGACATGGGGGAAGTGGAGGTGGAGCTTGAACATGCACTGCAATTTCAAGAGGAAGCTGATGACAAGATTTTCGGTTCAGAAAATTCTGACAGAATATGA 1047 0.4021 MGFPFFSSLSCFGDSSPKRVTNRSSSDTTLISTEPPSSIITELCHQFTLAEIQSVTRNFEKSLGESRFGIVHRGYVGDTSKPVAVKKYKKDSGFGFLEFKNEVVLLSQLHHPNLVSLVGFCVERNELILVNELLSKGNLYHHLHGRNIRPLPWKRRLQICIGVARGLHYLHTGAKYIIIHHDIKTSNILLDDNLEPKISGLTLSKRVSLRSSKSMKMTESDVKGTYGYKDPEYVRTGVLTEKSDIYSFGVVLLEVLTAKPPREIYREHLENCNQTLELYAEKNVDRFLKSKIAPECWKIFVDITERCLKAEGRERPDMGEVEVELEHALQFQEEADDKIFGSENSDRI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00011 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Stsc60492g00011 348 PANTHER OS07G0166700 PROTEIN 44 332 IPR045272 GO:0004714|GO:0006468
Stsc60492g00011 348 FunFam Os07g0541700 protein 133 225 - -
Stsc60492g00011 348 Gene3D Phosphorylase Kinase; domain 1 44 133 - -
Stsc60492g00011 348 SUPERFAMILY Protein kinase-like (PK-like) 36 328 IPR011009 -
Stsc60492g00011 348 Gene3D Transferase(Phosphotransferase) domain 1 134 346 - -
Stsc60492g00011 348 ProSiteProfiles Protein kinase domain profile. 57 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60492g00011 348 FunFam receptor-like protein kinase FERONIA 20 133 - -
Stsc60492g00011 348 SMART serkin_6 57 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60492g00011 348 Pfam Protein tyrosine and serine/threonine kinase 59 323 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00011 Stsc-Chr60492 60786 62084 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00011 9 348 Receptor kinase-like Gene Family AT3G51550 42.210 2.95e-79 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc60492g00011 PK_Tyr_Ser-Thr 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00011 - - adu:107486248 410.609