Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00010 ATGGGTGTTCTTTCAATGTTGTCTTGTTTCAGTAAATCTTCTTCTGATCCTAATCCAACACTCATGTCAGGAAAACCACCTTCATCCATTGTGAATGAACTCTGCCATCAGTTTTCTCTTGCAGAGATACAATCAGCAATAACAAGAAATCCCAATGAGTTCTCGAAACTAGGACAACCCGGAGGATTCAAGAATCTATTCAAAGGTTATCTGCTAAATAGTAATATCCCAGTTGCCATCAAGAGGTTCAGCTTTGGATCATTTTCAGAGCAGCAGTTCTCAGAGTTCAAGAATGAGATTGTCTTGCTTTGTCAGCTGCAGCATCCTAATCTCATGCCTCTAACCGGATTCTGTATCGAAAGAAACGAGTTGATTATCGTGTATGAATACATGACTAATGGCTCCCTTTTAGATCATCTTCATCATGTAAACCATGATTCACTTTCATGGAAGAGGAGGCTTCAAATTTGCATAGGAGTGGCTCGTGTGCTGCACTATCTTCACACCGGAGCCAAGCAACCTGTGATTCACCGCCACATTAAGACAAGTAACATTCTTTTGGATGATCAATGGGAGCCTAAAGTTTCAGGTTTTTCACTGTCCAAAAGGGTTCATCTAAGTATCTCGAAGTCATTGATTAGAGTGGAGTCAGATATAAGAGGAACATTTGGATATATTGATCCAGAATATGCAAGAACCGGAGTTCTTACCGAAAAATCAGATGTGTTTTCATTCGGCGTAGTCTTGTTAGAGGTTGTAAGTACAAGAACAATGCAAAAGGAACGTTTGTATAGACAGATTCATTCAATGAGGTCATATGCAGAGGAAATTGTTGATCCAGTTCTTAAGTCAAAGATTGATCCAGATTGCTGGAAAACATTTGTTGACATCACTGAGAGATGTTTGAGTGAAGATGGAAGGGAGAGGCCAGACATGGGGGAAGTAGAGTTGGAGCTTGAACATGCACTGCAATTGCAAGAGGAAGCTGATGCCAAGATTATTGGTTCAAAATATTTTGATAGAATATGA 1029 0.3984 MGVLSMLSCFSKSSSDPNPTLMSGKPPSSIVNELCHQFSLAEIQSAITRNPNEFSKLGQPGGFKNLFKGYLLNSNIPVAIKRFSFGSFSEQQFSEFKNEIVLLCQLQHPNLMPLTGFCIERNELIIVYEYMTNGSLLDHLHHVNHDSLSWKRRLQICIGVARVLHYLHTGAKQPVIHRHIKTSNILLDDQWEPKVSGFSLSKRVHLSISKSLIRVESDIRGTFGYIDPEYARTGVLTEKSDVFSFGVVLLEVVSTRTMQKERLYRQIHSMRSYAEEIVDPVLKSKIDPDCWKTFVDITERCLSEDGRERPDMGEVELELEHALQLQEEADAKIIGSKYFDRI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00010 342 PANTHER OS07G0166700 PROTEIN 35 326 IPR045272 GO:0004714|GO:0006468
Stsc60492g00010 342 Gene3D Transferase(Phosphotransferase) domain 1 131 338 - -
Stsc60492g00010 342 ProSiteProfiles Protein kinase domain profile. 52 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60492g00010 342 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Stsc60492g00010 342 Gene3D Phosphorylase Kinase; domain 1 19 130 - -
Stsc60492g00010 342 SUPERFAMILY Protein kinase-like (PK-like) 39 315 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00010 Stsc-Chr60492 59526 60554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00010 7 330 Receptor kinase-like Gene Family AT3G51550 44.910 3.87e-84 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc60492g00010 PK_Tyr_Ser-Thr 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00010 - - adu:107486248 566.614