Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc60492g00009 ATGCCTAACGGTTCCCTTCATGATCATCTTCTTGGTGGTATTGGAAGCTTTAAAAGTCCACTTTCATGGAATAGGAGGCTTCAAATTTGCATTTGGGTGGCACGTGCACTGCACTATCTTCACACTGGAGCCAAGTATGTTATCATTCACCGGGATGTTAAGACAGGAAACATTCTTTTGGATAACAATTTGGATGCTAGAGTTTCTGGTTTGTTCTTGTCCAAAAGGGGACCTCTTAGCATCTCAAAGTCATTGATTAAAGTGGTGTCACCGGTGATGGGAACTTATGGATATACTGATCCAGAATATGTGGCAACTGGTGTTTTGTCTGAAAAATCTGATGTATATTCATTTGGTGTAGTTCTGTTAGAAGTTCTTAGTGCAAAGCAGGCACCAGACATTTACAAGGAACACTTGGAAAACTGCAATCAATCACTCATGTCATATGCAGAGGAAATTGTTGACCCGTTTCTTAAGTCAAAGATTGCTCCAGATTGTTGGAAAACATTTCTTGACATCACTGAGAGATGTTTGCTCAAAGAGGGAAGGGAGAGGCCAGACATGGGGGAAGTGGAGCTCCAGCTTGAACATGCTCTAAAGTATCAAGAGGTAGCTGATACCAAGATTTGA 630 0.4143 MPNGSLHDHLLGGIGSFKSPLSWNRRLQICIWVARALHYLHTGAKYVIIHRDVKTGNILLDNNLDARVSGLFLSKRGPLSISKSLIKVVSPVMGTYGYTDPEYVATGVLSEKSDVYSFGVVLLEVLSAKQAPDIYKEHLENCNQSLMSYAEEIVDPFLKSKIAPDCWKTFLDITERCLLKEGRERPDMGEVELQLEHALKYQEVADTKI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc60492g00009 209 SUPERFAMILY Protein kinase-like (PK-like) 1 195 IPR011009 -
Stsc60492g00009 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Stsc60492g00009 209 Pfam Protein tyrosine and serine/threonine kinase 1 193 IPR001245 GO:0004672|GO:0006468
Stsc60492g00009 209 SMART serkin_6 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc60492g00009 209 Gene3D Transferase(Phosphotransferase) domain 1 1 208 - -
Stsc60492g00009 209 PANTHER OS07G0166700 PROTEIN 1 202 IPR045272 GO:0004714|GO:0006468
Stsc60492g00009 209 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc60492g00009 Stsc-Chr60492 58181 58810 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc60492g00009 1 206 Receptor kinase-like Gene Family AT3G51550 47.887 7.14e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc60492g00009 PK_Tyr_Ser-Thr 1.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc60492g00009 - - adu:107486248 327.02