Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc60491g00002 | ATGGATTCTTCTGCTTCCACATTCTTCAACGACCTTCCTCCTCTCAAGAGACTCAGATTACAACTCCAACAACAACAACAACACACTACTTCCTCTCCTTTACCCGCCAAGAAGCGCAAAGATTCTCGAAACGCTGCGTTTTACGAAAACCTAATCCCAATCCCAATCCCTCCTCCCGTCACTGCCTATTCTTTACCCGCCAAGAAACGAGTATGCGCGCTTCAACCCTTCCTCACTCAAAACGACGCCGTTTCGCCCTTCCAAATCGACCTCAACGTCGAGTTCCAAGAAAACGACGAAAACCTACAATCTCCCTCCAAATCTCCCCAACACTCTCAAGAGCAATCTCTTGACGGTAACGGTAACGTCAACGATTGCGACGCTGTTGACGATGACGACGGGATTTTATGCTGTGTGTGCCAGAGCACAGACGGAGACCCTGCGGATCCGATCGTCTTCTGCGACGGTTGCGATCTAATGGTTCACGCTTCCTGCTACGGAAACCCGCTCTCAAAATCAATCCCCGACGGCGACTGGTTCTGCGAACGGTGTCGTTTCAAACACCACGACGACGACGAAGCTGCTGCTTCTTCAGATCTGAGCTCCGGTTCTTGCTGCCTCTGTCCGGTGACCGAAGGCGCGATGAAGAAGACGGCGGATAACCGTTGGGCGCACATTGTGTGCGCGCTGCTGGTGCCGGAGGTGTTCTTCTTGGACCCTGAAGGGAGAGAGGGAATCGATTGCTCTATGGTTCCGAAGAAGAGGTGGTTGGAGAGGTGCTATGTGTGTGATTCTTGTGAGGGTTGTGCTGTTGTGTGCTCTGAGCCCAAGTGTGGTTTGGCGTTTCATGTTACGTGTGGGATCAGAGAGGAGCTTTGTATTGAGTATAAGGAAGGGAAGAAAGGCGCTACCATTGTTGCTGGCTTCTGCAAAACTCATACTCAAATTTGGGACAAGCAATCAGGGAAATACAAAATTGTTGCGGTTGAAGATAAAATGTAG | 1002 | 0.506 | MDSSASTFFNDLPPLKRLRLQLQQQQQHTTSSPLPAKKRKDSRNAAFYENLIPIPIPPPVTAYSLPAKKRVCALQPFLTQNDAVSPFQIDLNVEFQENDENLQSPSKSPQHSQEQSLDGNGNVNDCDAVDDDDGILCCVCQSTDGDPADPIVFCDGCDLMVHASCYGNPLSKSIPDGDWFCERCRFKHHDDDEAAASSDLSSGSCCLCPVTEGAMKKTADNRWAHIVCALLVPEVFFLDPEGREGIDCSMVPKKRWLERCYVCDSCEGCAVVCSEPKCGLAFHVTCGIREELCIEYKEGKKGATIVAGFCKTHTQIWDKQSGKYKIVAVEDKM | 333 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc60491g00002 | 333 | CDD | PHD_BRPF_JADE_like | 136 | 184 | - | - | |
Stsc60491g00002 | 333 | SMART | PHD_3 | 259 | 314 | IPR001965 | - | |
Stsc60491g00002 | 333 | SMART | PHD_3 | 136 | 185 | IPR001965 | - | |
Stsc60491g00002 | 333 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
Stsc60491g00002 | 333 | MobiDBLite | consensus disorder prediction | 99 | 124 | - | - | |
Stsc60491g00002 | 333 | CDD | ePHD | 205 | 313 | - | - | |
Stsc60491g00002 | 333 | Pfam | PHD-finger | 137 | 186 | IPR019787 | - | |
Stsc60491g00002 | 333 | SUPERFAMILY | FYVE/PHD zinc finger | 128 | 189 | IPR011011 | - | |
Stsc60491g00002 | 333 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 202 | 314 | IPR034732 | - | |
Stsc60491g00002 | 333 | Pfam | PHD-zinc-finger like domain | 204 | 313 | - | - | |
Stsc60491g00002 | 333 | PANTHER | PHD FINGER PROTEINS | 88 | 314 | - | - | |
Stsc60491g00002 | 333 | ProSiteProfiles | Zinc finger PHD-type profile. | 134 | 187 | IPR019787 | - | |
Stsc60491g00002 | 333 | MobiDBLite | consensus disorder prediction | 99 | 122 | - | - | |
Stsc60491g00002 | 333 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 122 | 191 | IPR013083 | - | |
Stsc60491g00002 | 333 | ProSitePatterns | Zinc finger PHD-type signature. | 137 | 184 | IPR019786 | - | |
Stsc60491g00002 | 333 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 200 | 316 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc60491g00002 | Stsc-Chr60491 | 33251 | 34857 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc60491g00002 | 22 | 331 | C2H2 Transcription Factor Family | AT3G14740 | 50.296 | 1.11e-100 | 298 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Stsc60491g00002 | zf-HC5HC2H_2 | 1.5e-26 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc60491g00002 | K11380 | - | gmx:100802652 | 380.563 |